Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.6e-68 263.1 176 100.0
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.1e-33 146.4 121 66.1
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.1e-29 134.0 123 62.6
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.1e-26 124.0 113 64.6
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.1e-24 117.5 123 56.1
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 1.8e-24 116.7 123 56.9
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.8e-24 116.7 128 55.5
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 6.9e-24 114.8 123 55.3
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 4.4e-23 112.1 123 56.1
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 4.4e-23 112.1 123 55.3
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 9.9e-23 110.9 129 58.9
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 3.8e-22 109.0 70 74.3
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 6.4e-22 108.2 71 71.8
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.1e-21 107.5 73 67.1
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.9e-21 106.7 129 69.8
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 3.2e-21 105.9 73 68.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 4.2e-21 105.5 72 68.1
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 5.4e-21 105.1 73 69.9
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 7.1e-21 104.8 74 68.9
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 1.2e-20 104.0 70 67.1
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 2.7e-20 102.8 73 65.8
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 2.7e-20 102.8 61 73.8
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 7.8e-20 101.3 72 63.9
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 1.0e-19 100.9 72 66.7
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 1.0e-19 100.9 74 63.5
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 1.0e-19 100.9 72 65.3
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.3e-19 100.5 70 65.7
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.3e-19 100.5 70 65.7
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.3e-19 100.5 70 65.7
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.3e-19 100.5 73 63.0
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.7e-19 100.1 73 63.0
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 1.7e-19 100.1 68 67.6
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.3e-19 99.8 67 68.7
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 2.3e-19 99.8 65 72.3
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 3.0e-19 99.4 69 63.8
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 3.0e-19 99.4 70 65.7
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 3.0e-19 99.4 63 73.0
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 3.9e-19 99.0 69 63.8
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 3.9e-19 99.0 70 64.3
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 5.1e-19 98.6 73 63.0
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 5.1e-19 98.6 69 63.8
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 6.6e-19 98.2 63 69.8
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 6.6e-19 98.2 63 69.8
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 6.6e-19 98.2 71 60.6
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 8.7e-19 97.8 67 70.1
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.1e-18 97.4 73 60.3
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.5e-18 97.1 73 64.4
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.5e-18 97.1 74 63.5
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.5e-18 97.1 73 64.4
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.9e-18 96.7 73 64.4
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 1.9e-18 96.7 124 46.8
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.5e-18 96.3 66 63.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 2.5e-18 96.3 65 72.3
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 2.5e-18 96.3 65 72.3
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 3.3e-18 95.9 73 63.0
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 3.3e-18 95.9 73 63.0
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 3.3e-18 95.9 73 63.0
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 3.3e-18 95.9 133 42.9
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.3e-18 95.9 67 67.2
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 4.3e-18 95.5 68 64.7
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.3e-18 95.5 67 64.2
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 4.3e-18 95.5 69 60.9
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 5.6e-18 95.1 70 62.9
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 5.6e-18 95.1 68 61.8
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 5.6e-18 95.1 123 47.2
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 7.3e-18 94.7 70 61.4
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 1.3e-17 94.0 68 61.8
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.3e-17 94.0 61 67.2
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 2.1e-17 93.2 70 61.4
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 3.6e-17 92.4 70 61.4
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 3.6e-17 92.4 119 46.2
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 3.6e-17 92.4 64 65.6
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 6.2e-17 91.7 67 64.2
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 6.2e-17 91.7 121 47.9
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 6.2e-17 91.7 121 47.1
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 6.2e-17 91.7 121 47.1
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 8.1e-17 91.3 67 67.2
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 1.1e-16 90.9 65 60.0
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.4e-16 90.5 79 59.5
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.8e-16 90.1 74 56.8
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.8e-16 90.1 64 64.1
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.8e-16 90.1 65 61.5
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.8e-16 90.1 65 64.6
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 3.1e-16 89.4 64 60.9
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 5.3e-16 88.6 69 59.4
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.3e-16 88.6 59 66.1
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 9.0e-16 87.8 59 64.4
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 3.4e-15 85.9 67 56.7
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 3.4e-15 85.9 55 67.3
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 1.7e-14 83.6 53 71.7
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.2e-14 83.2 51 74.5
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.9e-14 82.8 68 61.8
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 8.4e-14 81.3 53 66.0
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 7.1e-13 78.2 59 62.7
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.2e-12 77.4 54 61.1
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 2.1e-12 76.6 58 58.6
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.5e-12 75.9 60 56.7
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.3e-11 73.9 85 44.7
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.8e-11 73.6 64 57.8
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.8e-11 73.6 64 57.8
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 3.0e-11 72.8 59 62.7
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.1e-10 70.9 75 48.0
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.9e-10 70.1 60 53.3
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 2.5e-10 69.7 73 52.1
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 2.5e-10 69.7 73 52.1
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 3.3e-10 69.3 110 40.9
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.6e-09 67.0 73 50.7
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.1e-08 64.3 148 37.2
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.8e-08 63.5 64 51.6
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 9.0e-08 61.2 70 47.1
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 9.0e-08 61.2 43 65.1
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 3.4e-07 59.3 63 47.6


User provided reference genes

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