Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 1.4e-54 216.1 110 100.0
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 1.4e-27 126.3 118 64.4
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 7.8e-26 120.6 120 65.0
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 5.1e-25 117.9 113 65.5
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 8.1e-23 110.5 114 56.1
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 2.6e-21 105.5 115 56.5
Psat7g034120 Pisum sativum HOM05D007326 ORTHO05D009048 1.2e-18 96.7 97 64.9
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 7.8e-18 94.0 114 50.9
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 2.8e-15 85.5 118 52.5
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 3.1e-14 82.0 118 45.8
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 3.4e-13 78.6 114 45.6
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 5.8e-13 77.8 114 45.6
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 5.8e-13 77.8 114 45.6
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 7.6e-13 77.4 85 51.8
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 1.9e-11 72.8 82 50.0
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 7.1e-11 70.9 89 49.4
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 2.1e-10 69.3 60 60.0
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 3.5e-10 68.6 84 47.6
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 3.5e-10 68.6 113 43.4
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 6.0e-10 67.8 31 90.3
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 7.8e-10 67.4 93 47.3
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 7.8e-10 67.4 89 44.9
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 7.8e-10 67.4 87 48.3
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 1.0e-09 67.0 81 45.7
arahy.Tifrunner.gnm1.ann1.8E5M3M Arachis hypogaea HOM05D007326 ORTHO05D009048 1.0e-09 67.0 108 45.4
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.7e-09 66.2 87 43.7
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 1.7e-09 66.2 31 87.1
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 2.3e-09 65.9 31 90.3
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 2.3e-09 65.9 88 46.6
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 3.0e-09 65.5 31 87.1
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 3.0e-09 65.5 85 47.1
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 3.9e-09 65.1 31 83.9
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 3.9e-09 65.1 125 43.2
arahy.Tifrunner.gnm1.ann1.SUR8QF Arachis hypogaea HOM05D007326 ORTHO05D009048 5.1e-09 64.7 112 42.0
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 6.6e-09 64.3 81 43.2
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 6.6e-09 64.3 31 83.9
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 6.6e-09 64.3 31 83.9
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 8.7e-09 63.9 118 38.1
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 1.1e-08 63.5 91 46.2
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 1.5e-08 63.2 31 83.9
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 1.5e-08 63.2 96 41.7
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 1.5e-08 63.2 31 83.9
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.9e-08 62.8 31 83.9
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 1.9e-08 62.8 31 80.6
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 1.9e-08 62.8 31 80.6
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 1.9e-08 62.8 31 80.6
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 1.9e-08 62.8 31 80.6
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 1.9e-08 62.8 31 80.6
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 1.9e-08 62.8 31 80.6
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 1.9e-08 62.8 30 90.0
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 3.3e-08 62.0 117 41.0
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 4.3e-08 61.6 89 41.6
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 4.3e-08 61.6 123 35.0
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 4.3e-08 61.6 87 44.8
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 4.3e-08 61.6 92 45.7
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 5.6e-08 61.2 31 77.4
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 5.6e-08 61.2 31 77.4
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 5.6e-08 61.2 31 77.4
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 5.6e-08 61.2 31 77.4
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 5.6e-08 61.2 112 40.2
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 7.3e-08 60.8 120 38.3
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 9.6e-08 60.5 46 65.2
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 9.6e-08 60.5 100 41.0
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 9.6e-08 60.5 29 86.2
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 1.3e-07 60.1 101 41.6
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.3e-07 60.1 89 47.2
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 1.3e-07 60.1 67 46.3
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 1.6e-07 59.7 126 37.3
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 1.6e-07 59.7 44 63.6
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 1.6e-07 59.7 29 86.2
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 2.1e-07 59.3 106 36.8
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 2.8e-07 58.9 90 34.4
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 2.8e-07 58.9 67 44.8
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 2.8e-07 58.9 66 47.0
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 3.6e-07 58.5 94 41.5
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 3.6e-07 58.5 89 42.7
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 3.6e-07 58.5 99 41.4
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 3.6e-07 58.5 92 42.4
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 3.6e-07 58.5 88 44.3
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 3.6e-07 58.5 82 42.7
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 3.6e-07 58.5 82 41.5
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 4.8e-07 58.2 55 54.5
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 4.8e-07 58.2 105 41.0
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 6.2e-07 57.8 125 40.0
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 8.1e-07 57.4 117 38.5
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 8.1e-07 57.4 92 41.3
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 8.1e-07 57.4 82 41.5
CBR_g41366 Chara braunii HOM05D007326 ORTHO05D009048 1.1e-06 57.0 26 88.5
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 1.4e-06 56.6 67 43.3
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 2.4e-06 55.8 112 37.5
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 2.4e-06 55.8 99 39.4
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 3.1e-06 55.5 94 41.5
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 3.1e-06 55.5 31 77.4
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 3.1e-06 55.5 29 79.3
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 5.3e-06 54.7 104 38.5
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 9.0e-06 53.9 59 49.2


User provided reference genes

Program Settings