Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13216 Trifolium pratense HOM05D000503 ORTHO05D000361 1.0e-35 152.9 80 100.0
Ca_16216_v3 Cicer arietinum L. HOM05D000503 ORTHO05D000361 6.3e-33 143.7 80 93.8
Medtr3g078613 Medicago truncatula HOM05D000503 ORTHO05D000361 1.1e-24 116.3 80 81.2
Lj1g0015853 Lotus japonicus HOM05D000503 ORTHO05D000361 7.7e-23 110.2 86 76.7
Glyma.06G187000 Glycine max HOM05D000503 ORTHO05D000361 6.5e-22 107.1 80 76.2
Glyma.04G177900 Glycine max HOM05D000503 ORTHO05D000361 7.2e-21 103.6 80 73.8
Lj4g0019308 Lotus japonicus HOM05D000503 ORTHO05D000361 2.3e-19 98.6 88 70.5
arahy.Tifrunner.gnm1.ann1.JT9MTX Arachis hypogaea HOM05D000503 ORTHO05D000361 3.0e-19 98.2 80 70.0
Phvul.009G182800 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 5.1e-19 97.4 81 70.4
Psat0s2917g0080 Pisum sativum HOM05D000503 ORTHO05D000361 1.5e-18 95.9 80 71.2
arahy.Tifrunner.gnm1.ann1.L8Y5Z3 Arachis hypogaea HOM05D000503 ORTHO05D000361 2.6e-18 95.1 80 70.0
VMungo1309G3004 Vigna mungo HOM05D000503 ORTHO05D000361 2.6e-18 95.1 80 70.0
Phvul.003G196500 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 1.1e-16 89.7 80 66.2
Lalb_Chr08g0236131 Lupinus albus HOM05D000503 ORTHO05D000361 2.6e-15 85.1 84 65.5
Phvul.003G196300 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 3.5e-15 84.7 80 63.8
Ca_21877_v3 Cicer arietinum L. HOM05D000503 ORTHO05D000361 1.0e-14 83.2 88 64.8
Ca_21885_v3 Cicer arietinum L. HOM05D000503 ORTHO05D000361 1.0e-14 83.2 88 64.8
Glyma.05G033000 Glycine max HOM05D000503 ORTHO05D000361 1.3e-14 82.8 84 61.9
Glyma.17G093900 Glycine max HOM05D000503 ORTHO05D000361 1.7e-14 82.4 80 61.2
Medtr4g106590 Medicago truncatula HOM05D000503 ORTHO05D000361 1.7e-14 82.4 88 64.8
Psat4g055760 Pisum sativum HOM05D000503 ORTHO05D000361 2.2e-14 82.0 86 62.8
TPR.G38461 Trifolium pratense HOM05D000503 ORTHO05D000361 2.2e-14 82.0 87 64.4
VMungo1215G0500 Vigna mungo HOM05D000503 ORTHO05D000361 5.0e-14 80.9 80 62.5
Lalb_Chr12g0201321 Lupinus albus HOM05D000503 ORTHO05D000361 4.7e-12 74.3 61 68.9
Haze_07428 Corylus avellana HOM05D000503 ORTHO05D000361 6.1e-12 73.9 87 56.3
arahy.Tifrunner.gnm1.ann1.QA99NK Arachis hypogaea HOM05D000503 ORTHO05D000361 3.0e-11 71.6 92 52.2
Hma1.2p1_0002F.1_g002920 Hydrangea macrophylla HOM05D000503 ORTHO05D000361 3.3e-10 68.2 47 68.1
Lalb_Chr07g0182491 Lupinus albus HOM05D000503 ORTHO05D000361 4.4e-10 67.8 63 65.1
Manes.14G071300 Manihot esculenta HOM05D000503 ORTHO05D000361 5.7e-10 67.4 53 64.2
QL10p013702 Quercus lobata HOM05D000503 ORTHO05D000361 7.5e-10 67.0 80 56.2
arahy.Tifrunner.gnm1.ann1.Q1XFSF Arachis hypogaea HOM05D000503 ORTHO05D000361 2.2e-09 65.5 50 70.0
Cfa019060 Carpinus fangiana HOM05D000503 ORTHO05D000361 2.8e-09 65.1 90 50.0
Duzib068G0544 Durio zibethinus HOM05D000503 ORTHO05D000361 4.8e-09 64.3 69 55.1
Thecc.03G002500 Theobroma cacao HOM05D000503 ORTHO05D000361 4.8e-09 64.3 54 63.0
CANSAT80G1280 Cannabis sativa HOM05D000503 ORTHO05D000361 2.4e-08 62.0 46 67.4
CiPaw.11G032900 Carya illinoinensis HOM05D000503 ORTHO05D000361 2.4e-08 62.0 43 72.1
Manes.06G099700 Manihot esculenta HOM05D000503 ORTHO05D000361 2.4e-08 62.0 73 52.1
Dinv02656 Davidia involucrata HOM05D000503 ORTHO05D000361 5.3e-08 60.8 53 58.5
RcHm_v2.0_Chr7g0179851 Rosa chinensis HOM05D000503 ORTHO05D000361 9.1e-08 60.1 83 48.2
CSS0007928 Camellia sinensis var. sinensis HOM05D000503 ORTHO05D000361 1.2e-07 59.7 73 52.1
CSS0050000 Camellia sinensis var. sinensis HOM05D000503 ORTHO05D000361 1.2e-07 59.7 73 52.1
vmacro19352 Vaccinium macrocarpon HOM05D000503 ORTHO05D000361 1.2e-07 59.7 63 54.0
Duzib205G0057 Durio zibethinus HOM05D000503 ORTHO05D000361 2.0e-07 58.9 69 49.3
PGSC0003DMG400024578 Solanum tuberosum HOM05D000503 ORTHO05D000361 2.7e-07 58.5 85 47.1
TAR629G2186 Trochodendron aralioides HOM05D000503 ORTHO05D000361 3.5e-07 58.2 53 62.3
CAN.G853.29 Capsicum annuum HOM05D000503 ORTHO05D000361 4.5e-07 57.8 85 44.7
Ciclev10022334m.g Citrus clementina HOM05D000503 ORTHO05D000361 4.5e-07 57.8 75 50.7
vmacro16582 Vaccinium macrocarpon HOM05D000503 ORTHO05D000361 4.5e-07 57.8 53 52.8
FAN13G1671 Fragaria x ananassa HOM05D000503 ORTHO05D000361 5.9e-07 57.4 88 45.5
Nitab4.5_0000642g0280 Nicotiana tabacum HOM05D000503 ORTHO05D000361 7.7e-07 57.0 84 45.2
CsaV3_1G001860 Cucumis sativus L. HOM05D000447 ORTHO05D000315 1.0e-06 56.6 89 49.4
Peaxi162Scf00017g02232 Petunia axillaris HOM05D000503 ORTHO05D000361 1.0e-06 56.6 86 44.2
Potri.015G070000 Populus trichocarpa HOM05D000503 ORTHO05D000361 1.0e-06 56.6 86 44.2
Sabra15G0094100 Salix brachista HOM05D000503 ORTHO05D000361 1.0e-06 56.6 86 45.3
ClCG06G016650 Citrullus lanatus HOM05D000503 ORTHO05D000361 1.3e-06 56.2 86 48.8
SalBow5G1278 Salvia bowleyana HOM05D000503 ORTHO05D000361 1.3e-06 56.2 76 47.4
SalBow5G2264 Salvia bowleyana HOM05D000503 ORTHO05D000361 1.3e-06 56.2 76 47.4
Sopen03g032770 Solanum pennellii HOM05D000503 ORTHO05D000361 1.7e-06 55.8 86 44.2
Lj9C455G4 Lonicera japonica HOM05D000503 ORTHO05D000361 2.2e-06 55.5 80 50.0
Actinidia14996 Actinidia chinensis HOM05D000503 ORTHO05D000361 2.9e-06 55.1 66 50.0
Cpa.g.sc35.27 Carica papaya HOM05D000503 ORTHO05D000361 2.9e-06 55.1 29 89.7
Nitab4.5_0003694g0060 Nicotiana tabacum HOM05D000503 ORTHO05D000361 2.9e-06 55.1 80 48.8
Solyc03g113720.3 Solanum lycopersicum HOM05D000503 ORTHO05D000361 2.9e-06 55.1 86 44.2
FAN04G0740 Fragaria x ananassa HOM05D000503 ORTHO05D000361 3.8e-06 54.7 83 44.6
FAN08G1677 Fragaria x ananassa HOM05D000503 ORTHO05D000361 3.8e-06 54.7 83 44.6
BcaB02g06970 Brassica carinata HOM05D000503 ORTHO05D000361 5.0e-06 54.3 80 50.0
GSVIVG01007835001 Vitis vinifera HOM05D000503 ORTHO05D000361 5.0e-06 54.3 78 51.3
FvH4_5g16240 Fragaria vesca HOM05D000503 ORTHO05D000361 6.5e-06 53.9 83 44.6
FAN18G3937 Fragaria x ananassa HOM05D000503 ORTHO05D000361 6.5e-06 53.9 83 44.6
Lalb_Chr11g0070521 Lupinus albus HOM05D000503 ORTHO05D000361 8.5e-06 53.5 37 81.1
Rhsim08G0167300 Rhododendron simsii HOM05D000503 ORTHO05D000361 8.5e-06 53.5 42 64.3


User provided reference genes

Program Settings