Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 1.3e-117 426.4 221 100.0
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 4.8e-107 391.3 219 91.8
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 5.3e-106 387.9 219 90.0
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 4.5e-97 358.2 219 85.4
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 3.2e-95 352.1 219 81.7
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 6.0e-94 347.8 219 82.2
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 2.1e-91 339.3 219 78.5
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 2.8e-91 339.0 224 79.9
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 6.5e-88 327.8 219 75.8
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 2.8e-83 312.4 219 73.5
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 8.2e-83 310.8 222 74.3
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 1.5e-81 306.6 219 72.6
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 4.5e-81 305.1 217 73.7
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 2.2e-80 302.8 221 74.2
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 2.9e-80 302.4 220 72.3
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 5.0e-80 301.6 221 71.9
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 3.2e-79 298.9 219 70.3
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 5.5e-79 298.1 221 71.5
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 7.2e-79 297.7 221 71.0
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 2.7e-78 295.8 220 72.3
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 3.6e-78 295.4 218 70.6
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 6.1e-78 294.7 213 72.8
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 7.9e-78 294.3 220 69.5
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 1.0e-77 293.9 220 70.9
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 1.8e-77 293.1 220 71.4
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 2.3e-77 292.7 219 71.7
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 2.3e-77 292.7 219 69.4
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 3.0e-77 292.4 220 69.5
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 1.5e-76 290.0 219 71.2
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 2.6e-76 289.3 219 69.4
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 2.6e-76 289.3 221 71.5
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 4.3e-76 288.5 218 69.7
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 4.3e-76 288.5 218 70.6
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 5.7e-76 288.1 220 68.2
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 1.3e-75 287.0 218 70.2
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.7e-75 286.6 220 71.4
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 2.2e-75 286.2 219 68.9
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 3.7e-75 285.4 218 70.6
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 4.8e-75 285.0 218 70.2
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 1.1e-74 283.9 207 72.5
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 1.4e-74 283.5 220 69.1
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 3.1e-74 282.3 243 63.4
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 4.1e-74 282.0 191 74.3
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 9.1e-74 280.8 195 73.8
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 2.6e-73 279.3 247 64.0
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 2.6e-73 279.3 218 69.3
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 2.6e-73 279.3 218 69.3
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 4.5e-73 278.5 219 67.1
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 5.9e-73 278.1 218 66.5
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 5.9e-73 278.1 220 65.5
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 1.0e-72 277.3 218 66.1
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.0e-72 277.3 221 67.9
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 1.7e-72 276.6 218 67.0
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.7e-72 276.6 219 66.7
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 1.7e-72 276.6 218 66.5
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 2.2e-72 276.2 218 67.0
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 2.2e-72 276.2 219 67.1
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 1.1e-71 273.9 220 66.8
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.1e-71 273.9 220 66.8
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 5.5e-71 271.6 232 64.7
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 3.6e-70 268.9 217 65.9
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 5.2e-69 265.0 218 65.6
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 1.1e-68 263.8 220 63.6
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 1.7e-67 260.0 220 64.1
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.7e-67 260.0 171 76.0
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 3.7e-67 258.8 219 64.4
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 8.2e-67 257.7 171 74.9
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.1e-66 257.3 216 63.4
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 1.4e-66 256.9 219 62.1
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 1.8e-66 256.5 237 60.3
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 2.4e-66 256.1 219 61.6
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 1.6e-65 253.4 171 75.4
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 2.0e-65 253.1 187 70.6
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 5.9e-65 251.5 171 72.5
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 7.7e-65 251.1 219 59.4
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 3.8e-64 248.8 216 61.6
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 3.2e-63 245.7 218 63.8
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 7.2e-63 244.6 197 65.5
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 2.1e-62 243.0 224 61.6
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 5.2e-61 238.4 219 60.3
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 6.7e-61 238.0 174 67.2
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 9.7e-60 234.2 159 74.8
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 3.6e-54 215.7 230 53.9
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 4.7e-54 215.3 218 57.8
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 2.3e-53 213.0 154 76.0
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 6.8e-53 211.5 142 73.9
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 3.5e-49 199.1 225 51.6
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 6.5e-48 194.9 154 68.8
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 3.2e-47 192.6 144 66.0
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.3e-43 180.6 140 65.0
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.2e-41 174.1 144 67.4
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 1.6e-41 173.7 144 66.7
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.2e-38 164.1 218 46.8
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 9.8e-28 127.9 95 69.5
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.3e-24 117.5 80 75.0
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.3e-24 117.5 80 75.0
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 2.6e-20 103.2 59 84.7
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 1.3e-19 100.9 73 78.1
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 1.1e-18 97.8 217 35.5
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.8e-14 83.2 77 61.0
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 1.5e-12 77.4 143 39.2
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 2.6e-12 76.6 153 36.6
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 3.4e-12 76.3 77 44.2
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 2.8e-06 56.6 42 66.7


User provided reference genes

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