Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 4.4e-97 357.8 167 100.0
VMungo0647G0350 Vigna mungo HOM05D014755 ORTHO05D005146 2.6e-33 146.0 134 60.4
Phvul.001G030900 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 2.9e-32 142.5 147 57.1
Glyma.14G089087 Glycine max HOM05D014755 ORTHO05D005146 6.5e-32 141.4 153 54.9
Lj5g0011909 Lotus japonicus HOM05D014755 ORTHO05D005146 4.7e-30 135.2 162 48.8
Glyma.17G232800 Glycine max HOM05D014755 ORTHO05D005146 7.4e-28 127.9 155 49.0
Glyma.06G048800 Glycine max HOM05D014755 ORTHO05D005146 9.7e-28 127.5 151 47.0
Phvul.009G074100 Phaseolus vulgaris HOM05D014755 ORTHO05D012905 2.6e-25 119.4 160 40.6
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.3e-13 79.7 148 37.8
arahy.Tifrunner.gnm1.ann1.BL50ZB Arachis hypogaea HOM05D014755 ORTHO05D005146 6.7e-13 78.2 134 43.3
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.7e-13 78.2 148 37.2
Gohir.A06G025700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-12 77.4 145 37.2
Gohir.D06G022800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-12 77.4 147 37.4
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 2.0e-12 76.6 130 34.6
Gorai.010G027400 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.6e-12 76.3 147 37.4
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.7e-12 75.1 148 37.2
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 9.7e-12 74.3 147 38.8
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 1.3e-11 73.9 148 38.5
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.3e-11 73.9 134 36.6
Atru.chr13.869 Acer truncatum HOM05D011270 ORTHO05D012905 2.8e-11 72.8 169 30.8
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 2.8e-11 72.8 132 35.6
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 4.8e-11 72.0 131 38.9
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 8.2e-11 71.2 93 43.0
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 1.8e-10 70.1 93 37.6
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 3.1e-10 69.3 132 38.6
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 4.1e-10 68.9 131 36.6
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 5.3e-10 68.6 140 41.4
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 7.0e-10 68.2 133 33.1
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.6e-09 67.0 144 34.7
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 1.6e-09 67.0 158 36.7
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 2.0e-09 66.6 148 33.8
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 2.7e-09 66.2 128 35.2
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 4.5e-09 65.5 130 36.2
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 5.9e-09 65.1 96 40.6
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 5.9e-09 65.1 136 32.4
Prupe.1G419200 Prunus persica HOM05D005317 ORTHO05D005146 5.9e-09 65.1 139 34.5
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.0e-08 64.3 149 32.9
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 1.0e-08 64.3 112 40.2
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.3e-08 63.9 143 35.0
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 1.7e-08 63.5 129 35.7
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 1.7e-08 63.5 137 35.8
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.2e-08 63.2 134 35.1
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.2e-08 63.2 146 29.5
CARHR010290 Cardamine hirsuta HOM05D011270 ORTHO05D012905 3.8e-08 62.4 98 38.8
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 3.8e-08 62.4 132 35.6
Manes.05G183600 Manihot esculenta HOM05D005317 ORTHO05D005146 5.0e-08 62.0 136 32.4
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 5.0e-08 62.0 135 34.1
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 6.5e-08 61.6 95 43.2
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 6.5e-08 61.6 141 35.5
A06p06850 Brassica napus HOM05D011270 ORTHO05D012905 8.5e-08 61.2 152 31.6
BraA06t23899Z Brassica rapa HOM05D011270 ORTHO05D012905 8.5e-08 61.2 152 31.6
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 8.5e-08 61.2 161 30.4
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 8.5e-08 61.2 131 33.6
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 8.5e-08 61.2 134 36.6
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 1.1e-07 60.8 133 33.1
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.1e-07 60.8 128 30.5
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.1e-07 60.8 131 34.4
arahy.Tifrunner.gnm1.ann1.M6MJTX Arachis hypogaea HOM05D014755 ORTHO05D005146 1.5e-07 60.5 48 56.2
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.5e-07 60.5 131 34.4
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 1.5e-07 60.5 134 37.3
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 1.9e-07 60.1 136 33.8
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 1.9e-07 60.1 146 32.9
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 1.9e-07 60.1 142 33.8
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 1.9e-07 60.1 126 33.3
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 2.5e-07 59.7 143 32.9
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 3.2e-07 59.3 141 33.3
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 3.2e-07 59.3 138 34.1
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 9.4e-07 57.8 97 37.1
C05p08330 Brassica napus HOM05D011270 ORTHO05D012905 9.4e-07 57.8 152 30.9
BolC5t29583H Brassica oleracea HOM05D011270 ORTHO05D012905 9.4e-07 57.8 151 30.5
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 9.4e-07 57.8 142 33.1
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 9.4e-07 57.8 140 32.9
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 9.4e-07 57.8 125 32.8
BcaC05g24800 Brassica carinata HOM05D011270 ORTHO05D012905 1.2e-06 57.4 92 37.0
BraA08t35324Z Brassica rapa HOM05D011270 ORTHO05D012905 1.2e-06 57.4 93 37.6
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 1.2e-06 57.4 139 33.8
BcaC07g38545 Brassica carinata HOM05D011270 ORTHO05D012905 1.6e-06 57.0 104 32.7
C08p13500 Brassica napus HOM05D011270 ORTHO05D012905 1.6e-06 57.0 104 32.7
BolC8t48985H Brassica oleracea HOM05D011270 ORTHO05D012905 1.6e-06 57.0 104 32.7
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.6e-06 57.0 140 30.7
BcaC07g38553 Brassica carinata HOM05D011270 ORTHO05D012905 2.1e-06 56.6 93 36.6
A08p34120 Brassica napus HOM05D011270 ORTHO05D012905 2.1e-06 56.6 93 36.6
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 2.1e-06 56.6 129 31.0
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 2.1e-06 56.6 139 34.5
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 2.1e-06 56.6 96 36.5
BolC8t48976H Brassica oleracea HOM05D011270 ORTHO05D012905 2.7e-06 56.2 107 31.8
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.7e-06 56.2 132 33.3
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 2.7e-06 56.2 135 32.6
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 4.7e-06 55.5 136 32.4
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.7e-06 55.5 129 34.9
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 4.7e-06 55.5 129 34.9
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 4.7e-06 55.5 142 33.8
Sp1g08810 Schrenkiella parvula HOM05D001270 ORTHO05D001099 4.7e-06 55.5 119 31.9
BcaC07g38551 Brassica carinata HOM05D011270 ORTHO05D012905 6.1e-06 55.1 104 31.7
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 8.0e-06 54.7 137 34.3
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 8.0e-06 54.7 94 38.3
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 8.0e-06 54.7 137 32.8
Sc02g0008110 Simmondsia chinensis HOM05D005317 ORTHO05D005146 8.0e-06 54.7 137 32.1


User provided reference genes

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