Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 2.1e-194 682.2 345 100.0
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.5e-120 436.8 339 69.9
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 1.2e-109 400.6 321 67.0
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 5.6e-70 268.9 358 48.3
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.9e-65 253.8 361 47.6
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 1.5e-59 234.2 355 47.0
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 6.4e-58 228.8 366 44.3
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.5e-54 217.6 375 40.8
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 2.6e-51 206.8 359 41.2
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 3.8e-50 203.0 385 38.2
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 2.5e-46 190.3 369 39.0
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.3e-42 177.9 363 35.3
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 2.7e-40 170.2 350 38.0
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.9e-38 164.1 344 37.8
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 5.6e-38 162.5 348 37.4
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 7.3e-38 162.2 345 39.7
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 6.2e-37 159.1 364 34.6
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.4e-35 153.3 395 33.4
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 8.4e-34 148.7 380 33.9
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 2.4e-33 147.1 352 35.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 5.4e-33 146.0 333 34.5
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 5.6e-30 136.0 374 32.1
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 9.6e-30 135.2 374 31.8
arahy.Tifrunner.gnm1.ann1.E4Y0Z3 Arachis hypogaea HOM05D032995 ORTHO05D031506 6.2e-29 132.5 335 33.7
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 6.2e-29 132.5 387 32.0
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 6.2e-29 132.5 394 29.7
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 6.2e-29 132.5 393 31.3
arahy.Tifrunner.gnm1.ann1.I6QTPS Arachis hypogaea HOM05D032995 ORTHO05D031506 3.1e-28 130.2 335 34.3
arahy.Tifrunner.gnm1.ann1.34G3CR Arachis hypogaea HOM05D032995 ORTHO05D031506 4.0e-28 129.8 335 34.0
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 3.4e-27 126.7 367 29.2
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 5.8e-27 125.9 340 32.4
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 9.9e-27 125.2 378 30.7
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 1.1e-25 121.7 299 33.4
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 4.2e-25 119.8 357 32.5
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 6.0e-24 115.9 365 29.3
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 7.9e-24 115.5 367 30.5
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.0e-23 115.2 362 28.7
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.1e-23 112.8 337 30.9
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.1e-22 111.7 341 32.6
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.5e-22 111.3 346 30.9
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.5e-22 111.3 366 29.0
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.9e-22 110.9 350 30.6
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.5e-22 110.5 292 33.2
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.6e-22 109.4 375 30.9
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.3e-21 108.2 383 28.2
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.3e-21 108.2 403 29.3
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 6.2e-21 105.9 344 30.2
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 4.0e-20 103.2 363 28.7
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 6.9e-20 102.4 374 31.0
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.5e-19 101.3 353 30.3
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 2.0e-19 100.9 338 29.6
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 2.6e-19 100.5 363 28.1
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.0e-18 98.6 339 29.5
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.3e-18 98.2 341 31.7
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 1.7e-18 97.8 352 28.1
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 2.9e-18 97.1 393 27.5
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 3.8e-18 96.7 339 27.4
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 6.5e-18 95.9 338 31.1
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 3.2e-17 93.6 363 27.0
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 5.5e-17 92.8 343 30.3
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 5.5e-17 92.8 307 27.7
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.6e-16 91.3 343 29.7
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 2.1e-16 90.9 339 28.6
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 2.7e-16 90.5 354 28.0
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 3.5e-16 90.1 389 28.0
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 6.0e-16 89.4 376 29.3
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 1.8e-15 87.8 358 29.9
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 6.7e-15 85.9 351 29.1
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 8.7e-15 85.5 350 28.9
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.7e-15 85.5 361 28.8
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 8.7e-15 85.5 330 30.0
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.1e-14 85.1 359 28.7
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 2.5e-14 84.0 348 29.6
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 3.3e-14 83.6 375 28.0
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.4e-14 82.4 361 28.8
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 9.7e-14 82.0 369 26.6
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.7e-13 80.1 330 26.7
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 6.3e-13 79.3 120 43.3
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.2e-13 79.0 330 26.4
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.4e-12 78.2 386 26.9
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.4e-12 77.4 329 26.4
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 4.1e-12 76.6 373 24.7
TPR.G30198 Trifolium pratense HOM05D006874 ORTHO05D008334 4.1e-12 76.6 65 56.9
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.9e-12 75.9 347 28.0
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 4.5e-11 73.2 342 26.3
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.0e-10 72.0 374 24.6
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.2e-10 70.9 311 27.0
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 8.5e-10 68.9 174 31.6
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 4.2e-09 66.6 317 26.5
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.6e-08 64.7 175 32.6
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 2.1e-08 64.3 315 27.3
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.1e-08 64.3 139 34.5
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.3e-07 60.8 113 35.4
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.9e-07 60.1 366 24.6
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 5.1e-07 59.7 283 26.1
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 1.1e-06 58.5 319 25.1
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 9.7e-06 55.5 353 24.1


User provided reference genes

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