Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 2.6e-167 592.0 318 100.0
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 3.0e-86 322.8 269 70.3
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 5.3e-83 312.0 264 73.1
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 1.0e-78 297.7 271 63.8
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 1.8e-75 287.0 258 65.1
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 2.4e-75 286.6 257 65.4
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 2.2e-73 280.0 257 68.5
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 6.1e-71 271.9 282 58.2
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 3.9e-70 269.2 259 59.5
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 8.8e-70 268.1 262 58.0
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 1.7e-68 263.8 257 61.5
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 2.2e-68 263.5 261 59.0
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 2.8e-68 263.1 252 64.3
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 1.1e-67 261.2 260 60.0
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 6.9e-67 258.5 263 58.2
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 9.1e-67 258.1 260 56.9
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 2.0e-66 256.9 266 63.5
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 1.3e-65 254.2 262 56.9
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 6.5e-65 251.9 266 62.8
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 6.5e-65 251.9 260 60.4
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 1.9e-64 250.4 258 60.1
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 1.9e-64 250.4 257 58.8
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 1.8e-62 243.8 258 57.8
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 8.8e-62 241.5 252 58.7
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 4.4e-61 239.2 265 58.5
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 5.7e-61 238.8 257 56.8
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 7.4e-61 238.4 256 55.5
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 2.2e-60 236.9 256 54.3
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 1.1e-59 234.6 259 55.6
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 1.5e-58 230.7 258 57.4
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 4.5e-58 229.2 260 51.9
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 5.9e-58 228.8 260 56.9
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 2.2e-57 226.9 252 59.1
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 2.9e-57 226.5 251 57.4
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 3.8e-57 226.1 259 53.7
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 2.5e-56 223.4 266 57.9
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 4.7e-55 219.2 272 52.6
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 6.1e-55 218.8 267 52.1
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.0e-54 218.0 266 52.6
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 1.8e-54 217.2 267 52.8
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 2.3e-54 216.9 266 56.0
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 2.3e-54 216.9 251 56.2
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 3.0e-54 216.5 251 56.2
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 6.7e-54 215.3 268 50.4
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 1.1e-53 214.5 259 59.8
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 1.5e-53 214.2 271 55.0
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 3.3e-53 213.0 254 53.5
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 4.4e-53 212.6 283 55.5
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 4.4e-53 212.6 254 56.7
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 9.7e-53 211.5 272 51.8
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 1.3e-52 211.1 259 54.1
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 1.7e-52 210.7 253 55.3
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 2.8e-52 209.9 260 55.0
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 4.8e-52 209.1 253 59.7
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 6.3e-52 208.8 258 52.7
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 1.8e-51 207.2 260 50.0
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 1.8e-51 207.2 260 51.2
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 1.8e-51 207.2 260 50.0
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 1.8e-51 207.2 267 54.7
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 2.4e-51 206.8 260 49.2
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 2.4e-51 206.8 246 52.0
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 2.4e-51 206.8 246 52.0
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 2.4e-51 206.8 165 64.8
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 3.1e-51 206.5 260 49.2
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.2e-50 204.5 249 51.8
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 3.5e-50 203.0 319 45.8
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 4.5e-50 202.6 248 51.2
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 5.9e-50 202.2 262 49.6
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 5.9e-50 202.2 260 48.8
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 7.7e-50 201.8 269 49.1
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 7.7e-50 201.8 260 47.3
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 1.3e-49 201.1 260 49.6
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 3.8e-49 199.5 250 50.4
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 5.0e-49 199.1 250 50.4
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 8.5e-49 198.4 245 49.0
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 1.5e-48 197.6 256 50.8
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 1.5e-48 197.6 244 53.7
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 1.5e-48 197.6 259 53.7
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 1.5e-48 197.6 260 51.2
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.5e-48 196.8 264 46.2
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 2.5e-48 196.8 261 50.2
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 1.6e-47 194.1 265 49.1
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 4.7e-47 192.6 249 49.4
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 4.7e-47 192.6 258 47.3
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 6.1e-47 192.2 278 50.7
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 8.0e-47 191.8 250 51.2
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 1.0e-46 191.4 225 53.3
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.4e-46 191.0 177 57.6
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 1.4e-46 191.0 295 47.8
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 1.8e-46 190.7 250 49.6
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 1.8e-46 190.7 253 49.4
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 2.3e-46 190.3 254 50.8
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 2.3e-46 190.3 247 50.2
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 6.7e-46 188.7 235 50.6
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 6.7e-46 188.7 247 50.6
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 8.8e-46 188.3 235 50.2
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 8.8e-46 188.3 227 50.7
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 8.8e-46 188.3 251 51.0
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 1.2e-45 188.0 263 49.8
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 1.5e-45 187.6 259 49.0
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 2.0e-45 187.2 164 60.4
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 7.5e-45 185.3 254 44.9
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.3e-44 184.5 193 61.7
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 1.1e-43 181.4 256 52.0
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 1.1e-43 181.4 249 47.4
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 1.2e-42 177.9 258 49.6
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 1.6e-42 177.6 244 47.1
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 3.5e-42 176.4 166 54.2
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 3.5e-42 176.4 254 43.7
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 4.5e-42 176.0 167 58.1
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 3.8e-41 172.9 180 58.3
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 2.5e-40 170.2 137 62.8
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 7.2e-40 168.7 265 49.4
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 6.1e-39 165.6 173 52.6
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 8.0e-39 165.2 251 46.6
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 5.2e-38 162.5 267 48.3
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 1.2e-37 161.4 249 45.8
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 1.5e-37 161.0 279 46.6
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 2.8e-36 156.8 246 46.7
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 1.1e-35 154.8 272 42.6
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 1.4e-35 154.5 172 51.2
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 3.1e-35 153.3 263 42.2
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 3.5e-34 149.8 360 38.9
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 7.7e-34 148.7 376 31.9
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.0e-33 148.3 157 51.0
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 8.9e-30 135.2 143 54.5
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 2.4e-27 127.1 143 51.0
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 5.4e-27 125.9 292 32.5
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 1.1e-24 118.2 129 51.2
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 1.9e-24 117.5 162 48.1
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 2.5e-24 117.1 221 36.2
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 4.0e-22 109.8 157 47.8
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 7.5e-21 105.5 244 41.4
RcHm_v2.0_Chr6g0310491 Rosa chinensis HOM05D004579 ORTHO05D005376 2.7e-18 97.1 126 57.9
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 3.5e-18 96.7 65 67.7
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 4.6e-18 96.3 134 54.5
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 3.0e-17 93.6 92 53.3
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 3.0e-17 93.6 247 35.6
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 6.6e-17 92.4 85 52.9
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 1.5e-16 91.3 196 33.7
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.5e-16 90.5 132 56.8
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 3.3e-16 90.1 93 46.2
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 3.6e-15 86.7 135 40.7
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 2.4e-11 73.9 55 65.5
PSO017G0877 Papaver somniferum HOM05D004579 ORTHO05D005376 2.8e-07 60.5 39 66.7
PSO017G5975 Papaver somniferum HOM05D004579 ORTHO05D005376 2.8e-07 60.5 39 66.7
Medtr3g104160 Medicago truncatula HOM05D004579 ORTHO05D005376 6.8e-06 55.8 41 75.6


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