Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13103 Trifolium pratense HOM05D007829 ORTHO05D009903 2.8e-85 318.5 159 100.0
Medtr2g025760 Medicago truncatula HOM05D007829 ORTHO05D009903 1.0e-71 273.5 158 85.4
Psat1g175960 Pisum sativum HOM05D007829 ORTHO05D009903 2.0e-70 269.2 159 84.9
Lj6g0010113 Lotus japonicus HOM05D007829 ORTHO05D009903 2.3e-58 229.2 155 74.8
arahy.Tifrunner.gnm1.ann1.G424KC Arachis hypogaea HOM05D007829 ORTHO05D009903 1.7e-53 213.0 155 69.0
Glyma.15G114900 Glycine max HOM05D007829 ORTHO05D009903 2.2e-45 186.0 158 63.9
Glyma.09G010400 Glycine max HOM05D007829 ORTHO05D009903 2.9e-45 185.7 159 63.5
CiPaw.10G078200 Carya illinoinensis HOM05D007829 ORTHO05D009903 1.1e-44 183.7 154 55.2
Ciclev10018278m.g Citrus clementina HOM05D007829 ORTHO05D009903 1.3e-42 176.8 109 69.7
Manes.08G071000 Manihot esculenta HOM05D007829 ORTHO05D009903 5.0e-42 174.9 156 53.2
MD10G1332100 Malus domestica HOM05D007829 ORTHO05D009903 6.6e-42 174.5 156 54.5
Thecc.06G233800 Theobroma cacao HOM05D007829 ORTHO05D009903 6.6e-42 174.5 156 55.8
TWI38G1785 Tripterygium wilfordii HOM05D007829 ORTHO05D009903 1.1e-41 173.7 154 53.9
VMungo0540G1426 Vigna mungo HOM05D007829 ORTHO05D009903 4.3e-41 171.8 158 60.1
Cpa.g.sc75.113 Carica papaya HOM05D007829 ORTHO05D009903 9.5e-41 170.6 152 52.0
Prupe.4G010000 Prunus persica HOM05D007829 ORTHO05D009903 9.5e-41 170.6 154 53.2
Rhsim02G0099400 Rhododendron simsii HOM05D007829 ORTHO05D009903 9.5e-41 170.6 151 55.6
Phvul.006G143000 Phaseolus vulgaris HOM05D007829 ORTHO05D009903 2.1e-40 169.5 158 58.9
Lalb_Chr15g0088001 Lupinus albus HOM05D007829 ORTHO05D009903 4.7e-40 168.3 155 60.0
Nn1g07397 Nelumbo nucifera HOM05D007829 ORTHO05D009903 1.4e-39 166.8 159 52.2
Potri.016G013200 Populus trichocarpa HOM05D007829 ORTHO05D009903 1.4e-39 166.8 157 52.2
Actinidia39272 Actinidia chinensis HOM05D007829 ORTHO05D009903 1.8e-39 166.4 155 52.9
CSS0014217 Camellia sinensis var. sinensis HOM05D007829 ORTHO05D009903 1.2e-38 163.7 156 51.3
PGR004G1136 Punica granatum HOM05D007829 ORTHO05D009903 1.5e-38 163.3 153 52.9
Dinv07407 Davidia involucrata HOM05D007829 ORTHO05D009903 2.2e-37 159.5 166 48.8
Gorai.011G009700 Gossypium raimondii HOM05D007829 ORTHO05D009903 4.9e-37 158.3 158 50.6
Gohir.A10G009200 Gossypium hirsutum HOM05D007829 ORTHO05D009903 6.4e-37 157.9 158 50.0
Gohir.D10G008900 Gossypium hirsutum HOM05D007829 ORTHO05D009903 6.4e-37 157.9 158 50.6
Eucgr.D01411 Eucalyptus grandis HOM05D007829 ORTHO05D009903 1.1e-36 157.1 160 54.4
COL.COLO4_31889 Corchorus olitorius HOM05D007829 ORTHO05D009903 5.4e-36 154.8 127 58.3
Hma1.2p1_0657F.1_g197120 Hydrangea macrophylla HOM05D007829 ORTHO05D009903 5.4e-36 154.8 156 51.3
Aqoxy2G02687 Aquilegia oxysepala HOM05D007829 ORTHO05D009903 1.2e-35 153.7 124 50.8
PSO675G8147 Papaver somniferum HOM05D007829 ORTHO05D009903 2.1e-35 152.9 115 59.1
Sc05g0009620 Simmondsia chinensis HOM05D007829 ORTHO05D009903 2.1e-35 152.9 156 49.4
Cc00_g34400 Coffea canephora HOM05D007829 ORTHO05D009903 2.3e-34 149.4 175 47.4
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 2.3e-34 149.4 105 59.0
PSO541G5076 Papaver somniferum HOM05D007829 ORTHO05D009903 3.9e-34 148.7 121 56.2
THA.LOC104813576 Tarenaya hassleriana HOM05D007829 ORTHO05D009903 1.1e-33 147.1 158 43.0
Sabra16G0002200 Salix brachista HOM05D007829 ORTHO05D009903 4.3e-33 145.2 173 43.4
CARHR229280 Cardamine hirsuta HOM05D007829 ORTHO05D009903 2.1e-32 142.9 153 46.4
TPR.G18790 Trifolium pratense HOM05D007829 ORTHO05D009903 1.1e-31 140.6 65 100.0
Migut.M01399 Erythranthe guttata HOM05D007829 ORTHO05D009903 2.3e-31 139.4 155 43.9
TAR627G0564 Trochodendron aralioides HOM05D007829 ORTHO05D009903 3.1e-31 139.0 158 45.6
TAR627G1193 Trochodendron aralioides HOM05D007829 ORTHO05D009903 3.1e-31 139.0 158 45.6
SGA_v2.0_scaffold4G01872 Striga asiatica HOM05D007829 ORTHO05D009903 4.0e-31 138.7 151 45.7
Duzib235G0645 Durio zibethinus HOM05D007829 ORTHO05D009903 5.2e-31 138.3 94 58.5
Sp7g20500 Schrenkiella parvula HOM05D007829 ORTHO05D009903 8.9e-31 137.5 153 44.4
BraA01t01318Z Brassica rapa HOM05D007829 ORTHO05D009903 1.5e-30 136.7 153 43.1
A01p13730 Brassica napus HOM05D007829 ORTHO05D009903 9.9e-30 134.0 105 54.3
CDE11G1237 Ceratophyllum demersum HOM05D007829 ORTHO05D009903 2.2e-29 132.9 114 50.9
Sopen11g007080 Solanum pennellii HOM05D007829 ORTHO05D009903 6.4e-29 131.3 131 47.3
QL05p069622 Quercus lobata HOM05D007829 ORTHO05D009903 1.1e-28 130.6 170 41.8
C01p16640 Brassica napus HOM05D007829 ORTHO05D009903 2.4e-28 129.4 153 42.5
BolC1t01611H Brassica oleracea HOM05D007829 ORTHO05D009903 2.4e-28 129.4 153 42.5
Carub.0007s1893 Capsella rubella HOM05D007829 ORTHO05D009903 2.4e-28 129.4 158 41.8
AT4G22370 Arabidopsis thaliana HOM05D007829 ORTHO05D009903 4.1e-28 128.6 113 53.1
BcaC09g51100 Brassica carinata HOM05D007829 ORTHO05D009903 4.1e-28 128.6 153 42.5
PGSC0003DMG400013350 Solanum tuberosum HOM05D007829 ORTHO05D009903 4.1e-28 128.6 123 48.8
FvH4_3g00940 Fragaria vesca HOM05D007829 ORTHO05D009903 9.2e-28 127.5 151 43.0
Sabra16G0015800 Salix brachista HOM05D007829 ORTHO05D009903 9.2e-28 127.5 157 41.4
Oeu002768.1 Olea europaea HOM05D007829 ORTHO05D009903 6.0e-27 124.8 159 43.4
Solyc11g012300.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 1.3e-26 123.6 145 43.4
FAN21G3309 Fragaria x ananassa HOM05D007829 ORTHO05D009903 3.0e-26 122.5 153 43.8
RcHm_v2.0_Chr5g0001461 Rosa chinensis HOM05D007829 ORTHO05D009903 3.9e-26 122.1 156 42.9
TAR629G0037 Trochodendron aralioides HOM05D007829 ORTHO05D009903 1.9e-25 119.8 109 53.2
CANSAT56G1477 Cannabis sativa HOM05D007829 ORTHO05D009903 3.3e-25 119.0 160 43.1
Peaxi162Scf00352g00215 Petunia axillaris HOM05D007829 ORTHO05D009903 1.1e-23 114.0 94 47.9
FAN25G0937 Fragaria x ananassa HOM05D007829 ORTHO05D009903 5.2e-23 111.7 165 39.4
ATR0712G049 Amborella trichopoda HOM05D007829 ORTHO05D009903 5.8e-22 108.2 101 42.6
Thhalv10027004m.g Eutrema salsugineum HOM05D007829 ORTHO05D009903 4.2e-20 102.1 127 41.7
MBI19_g06149_MAGBIO Magnolia biondii HOM05D007829 ORTHO05D009903 9.3e-20 100.9 93 45.2
AL7G31240 Arabidopsis lyrata HOM05D007829 ORTHO05D009903 3.5e-19 99.0 98 50.0
Aa31LG6G4470 Aethionema arabicum HOM05D007829 ORTHO05D009903 6.0e-19 98.2 141 40.4
Cfa000096 Carpinus fangiana HOM05D007829 ORTHO05D009903 1.3e-18 97.1 61 63.9
Sed0017863 Sechium edule HOM05D007829 ORTHO05D009903 4.0e-15 85.5 104 38.5
unitig_5.g30996 Utricularia gibba HOM05D000093 ORTHO05D001309 6.9e-15 84.7 107 38.3
MBI16_g31712_MAGBIO Magnolia biondii HOM05D007829 ORTHO05D009903 4.4e-14 82.0 93 37.6
Rhsim07G0088000 Rhododendron simsii HOM05D002745 ORTHO05D002945 1.1e-12 77.4 102 37.3
SalBow8G1028 Salvia bowleyana HOM05D007829 ORTHO05D009903 1.1e-12 77.4 151 35.1
DCAR_000629 Daucus carota HOM05D002745 ORTHO05D002945 1.9e-12 76.6 106 37.7
CSS0032449 Camellia sinensis var. sinensis HOM05D002745 ORTHO05D002945 7.1e-12 74.7 103 37.9
Sabra01G0075300 Salix brachista HOM05D002745 ORTHO05D002945 2.7e-11 72.8 95 36.8
Sp7g00520 Schrenkiella parvula HOM05D002745 ORTHO05D002945 6.0e-11 71.6 99 34.3
Duzib205G0538 Durio zibethinus HOM05D002745 ORTHO05D002945 8.7e-10 67.8 102 32.4
Thecc.03G284700 Theobroma cacao HOM05D002745 ORTHO05D002945 8.7e-10 67.8 102 32.4
Potri.001G100500 Populus trichocarpa HOM05D002745 ORTHO05D002945 1.1e-09 67.4 102 33.3
Potri.003G131500 Populus trichocarpa HOM05D002745 ORTHO05D002945 1.9e-09 66.6 102 32.4
SEGI_16879 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 1.9e-09 66.6 99 34.3
Sabra03G0093800 Salix brachista HOM05D002745 ORTHO05D002945 2.5e-09 66.2 102 32.4
ClCG01G021470 Citrullus lanatus HOM05D007829 ORTHO05D009903 4.3e-09 65.5 147 27.9
SEGI_30590 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 5.6e-09 65.1 125 31.2
AL7G47950 Arabidopsis lyrata HOM05D002745 ORTHO05D002945 1.6e-08 63.5 100 31.0
AT5G41470 Arabidopsis thaliana HOM05D002745 ORTHO05D002945 1.6e-08 63.5 100 32.0
Carub.0007s3403 Capsella rubella HOM05D002745 ORTHO05D002945 1.6e-08 63.5 100 31.0
Actinidia33738 Actinidia chinensis HOM05D002745 ORTHO05D002945 2.8e-08 62.8 82 36.6
unitig_748.g7131 Utricularia gibba HOM05D007829 ORTHO05D009903 2.8e-08 62.8 65 43.1
CDE11G0610 Ceratophyllum demersum HOM05D002745 ORTHO05D002945 3.6e-08 62.4 105 35.2
Sc22g0005360 Simmondsia chinensis HOM05D002745 ORTHO05D002945 6.2e-08 61.6 102 31.4
Sed0022750 Sechium edule HOM05D007829 ORTHO05D009903 8.1e-08 61.2 96 36.5
PGR042G0864 Punica granatum HOM05D002745 ORTHO05D002945 1.4e-07 60.5 82 31.7
Dinv38911 Davidia involucrata HOM05D002745 ORTHO05D002945 2.4e-07 59.7 90 33.3
Gohir.A12G234200 Gossypium hirsutum HOM05D002745 ORTHO05D002945 2.4e-07 59.7 89 31.5
Gohir.D12G233100 Gossypium hirsutum HOM05D002745 ORTHO05D002945 2.4e-07 59.7 89 31.5
Gorai.008G249500 Gossypium raimondii HOM05D002745 ORTHO05D002945 4.0e-07 58.9 89 31.5
Cpa.g.sc180.25 Carica papaya HOM05D002745 ORTHO05D002945 5.3e-07 58.5 103 30.1
QL12p032067 Quercus lobata HOM05D002745 ORTHO05D002945 9.0e-07 57.8 102 28.4
Thecc.08G146300 Theobroma cacao HOM05D002745 ORTHO05D002945 1.2e-06 57.4 95 30.5
CDE05G0322 Ceratophyllum demersum HOM05D002745 ORTHO05D002945 2.6e-06 56.2 81 33.3
RcHm_v2.0_Chr7g0231601 Rosa chinensis HOM05D002745 ORTHO05D002945 2.6e-06 56.2 91 33.0
arahy.Tifrunner.gnm1.ann1.10XUBW Arachis hypogaea HOM05D007829 ORTHO05D009903 4.5e-06 55.5 34 70.6
HPP92_028537 Vanilla planifolia HOM05D002745 ORTHO05D002945 5.8e-06 55.1 101 30.7


User provided reference genes

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