Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1301 Trifolium pratense HOM05D302815 ORTHO05D004132 7.0e-50 200.3 100 100.0
TPR.G1266 Trifolium pratense HOM05D001971 ORTHO05D411975 9.6e-31 136.7 100 73.0
TPR.G1275 Trifolium pratense HOM05D003595 ORTHO05D004132 2.5e-10 68.9 48 72.9
Medtr5g096855 Medicago truncatula HOM05D003595 ORTHO05D004132 4.2e-10 68.2 46 73.9
Medtr3g061570 Medicago truncatula HOM05D003595 ORTHO05D004132 1.0e-08 63.5 40 77.5
TPR.G30109 Trifolium pratense HOM05D003595 ORTHO05D004132 3.3e-07 58.5 46 60.9
Glyma.18G070800 Glycine max HOM05D003595 ORTHO05D004132 5.7e-07 57.8 42 61.9
CANSAT54G2715 Cannabis sativa HOM05D003595 ORTHO05D004132 1.3e-06 56.6 40 60.0
LjContig00081g0018996 Lotus japonicus HOM05D003595 ORTHO05D004132 1.3e-06 56.6 42 66.7
arahy.Tifrunner.gnm1.ann1.ST54C5 Arachis hypogaea HOM05D003595 ORTHO05D004132 1.6e-06 56.2 35 68.6
Ca_14877_v3 Cicer arietinum L. HOM05D003595 ORTHO05D004132 1.6e-06 56.2 31 77.4
Prupe.4G249800 Prunus persica HOM05D003595 ORTHO05D004132 1.6e-06 56.2 39 69.2
CSS0046994 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 6.2e-06 54.3 28 82.1
CSS0047718 Camellia sinensis var. sinensis HOM05D003595 ORTHO05D004132 6.2e-06 54.3 28 82.1
MD03G1174700 Malus domestica HOM05D003595 ORTHO05D004132 6.2e-06 54.3 40 65.0
Nitab4.5_0002741g0180 Nicotiana tabacum HOM05D003595 ORTHO05D004132 6.2e-06 54.3 32 65.6


User provided reference genes

Program Settings