Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 2.5e-160 568.9 326 100.0
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 1.6e-135 486.5 292 91.8
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 3.6e-135 485.3 298 89.3
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 1.5e-125 453.4 297 80.1
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.7e-124 449.9 297 79.5
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 2.2e-124 449.5 289 81.3
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 2.2e-124 449.5 297 79.5
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 8.3e-124 447.6 289 81.3
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.0e-118 429.1 294 79.3
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 2.4e-115 419.5 292 74.7
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.2e-114 417.2 294 74.8
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.7e-114 416.0 291 74.6
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 4.5e-114 415.2 292 74.3
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 2.3e-113 412.9 298 72.8
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.1e-112 410.6 298 72.1
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.5e-112 410.2 289 74.4
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.5e-112 409.5 292 72.9
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 5.6e-112 408.3 298 71.8
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.6e-111 406.8 288 73.3
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.1e-111 406.4 297 71.0
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 2.1e-111 406.4 298 71.5
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.8e-111 406.0 288 72.9
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 4.7e-111 405.2 278 74.5
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 4.7e-111 405.2 295 71.9
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 8.0e-111 404.4 296 71.3
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 8.0e-111 404.4 291 75.9
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.8e-110 403.3 291 71.1
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.3e-110 402.9 286 73.1
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.3e-110 402.9 294 73.1
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 4.0e-110 402.1 276 73.9
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 4.0e-110 402.1 291 70.8
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 5.2e-110 401.7 264 76.1
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 5.2e-110 401.7 291 72.2
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 6.8e-110 401.4 293 71.0
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 8.9e-110 401.0 291 70.8
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 2.6e-109 399.4 286 72.0
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 3.4e-109 399.1 275 74.2
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 3.4e-109 399.1 282 73.0
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 3.4e-109 399.1 294 72.1
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 4.4e-109 398.7 293 70.6
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 5.7e-109 398.3 288 71.9
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 7.5e-109 397.9 292 71.2
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 9.8e-109 397.5 279 73.1
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.7e-108 396.7 278 73.4
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 2.9e-108 396.0 278 73.7
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 3.7e-108 395.6 278 73.4
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 4.9e-108 395.2 293 70.3
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 4.9e-108 395.2 278 73.0
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 4.9e-108 395.2 278 73.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 4.9e-108 395.2 281 73.3
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 6.4e-108 394.8 291 69.1
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 8.3e-108 394.4 278 73.4
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 8.3e-108 394.4 288 69.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 8.3e-108 394.4 291 72.5
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 3.2e-107 392.5 289 70.9
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 5.4e-107 391.7 289 70.6
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 5.4e-107 391.7 280 71.8
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 7.0e-107 391.3 281 72.2
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 2.7e-106 389.4 292 70.5
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 3.5e-106 389.0 279 72.0
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 7.8e-106 387.9 280 71.4
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 7.8e-106 387.9 289 69.9
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 7.8e-106 387.9 282 71.6
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.0e-105 387.5 291 68.7
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.0e-105 387.5 280 71.4
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.3e-105 387.1 299 67.2
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.7e-105 386.7 278 71.2
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 3.9e-105 385.6 280 71.1
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 3.9e-105 385.6 314 65.0
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 6.6e-105 384.8 299 66.6
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.9e-104 383.3 287 70.0
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.5e-104 382.9 270 73.0
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 2.5e-104 382.9 288 68.4
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 3.3e-104 382.5 289 68.9
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 3.3e-104 382.5 292 69.2
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.3e-104 382.1 286 70.6
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.3e-104 382.1 285 70.2
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 7.3e-104 381.3 274 70.8
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.2e-103 380.6 291 67.0
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.8e-102 376.7 301 65.1
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 4.0e-102 375.6 280 70.0
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 5.2e-102 375.2 293 67.2
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 2.0e-101 373.2 277 69.0
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 5.8e-101 371.7 277 68.6
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 2.9e-100 369.4 223 80.7
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 2.9e-100 369.4 223 80.7
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.1e-99 367.5 282 67.0
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 4.1e-99 365.5 259 71.8
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.2e-98 364.0 278 71.9
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 8.6e-97 357.8 226 77.9
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 2.5e-96 356.3 290 64.8
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 1.6e-95 353.6 229 77.3
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.4e-93 345.9 229 75.5
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 5.8e-93 345.1 222 77.0
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.7e-92 343.6 291 63.2
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 2.2e-92 343.2 280 65.0
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 8.3e-92 341.3 294 63.9
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.9e-91 340.1 285 63.2
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 6.0e-90 335.1 280 62.5
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.7e-84 317.0 274 59.9
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 1.7e-84 317.0 265 61.1
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 2.9e-84 316.2 280 58.2
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 7.1e-83 311.6 205 76.1
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 7.3e-80 301.6 261 60.2
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 1.4e-78 297.4 246 64.2
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 5.2e-78 295.4 303 57.8
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 2.6e-77 293.1 265 56.2
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.4e-75 287.3 201 78.6
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 7.6e-69 265.0 279 50.9
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.0e-57 226.5 221 55.7
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 4.8e-55 219.2 234 55.1
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 4.0e-54 216.1 270 48.5
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 9.7e-48 194.9 161 64.0
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 7.2e-43 178.7 161 62.1
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.4e-38 164.5 103 72.8
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 2.4e-14 84.0 68 57.4
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.1e-10 70.9 84 42.9
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 5.7e-08 62.8 64 59.4


User provided reference genes

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