Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 2.5e-201 705.3 364 100.0
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 1.4e-180 636.3 363 89.3
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.5e-161 573.2 349 85.1
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 2.7e-160 568.9 371 77.9
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 6.1e-152 541.2 369 77.0
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 8.0e-152 540.8 372 76.3
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 3.4e-150 535.4 370 75.7
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 5.9e-147 524.6 372 73.1
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 1.5e-145 520.0 371 74.1
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 1.6e-144 516.5 372 72.3
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 2.0e-142 509.6 408 66.9
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 2.6e-142 509.2 373 71.3
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 5.8e-142 508.1 305 86.9
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.0e-122 444.1 373 64.3
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 1.3e-122 443.7 374 61.8
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 4.3e-121 438.7 371 62.3
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 5.6e-121 438.3 373 60.6
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 1.2e-120 437.2 367 62.1
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.2e-120 437.2 373 60.6
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 1.2e-120 437.2 374 60.7
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 2.1e-120 436.4 374 60.4
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.1e-119 434.1 373 60.1
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.1e-119 434.1 373 60.1
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 8.9e-119 431.0 371 60.4
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 1.5e-118 430.3 366 61.7
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.9e-117 426.0 367 60.2
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 4.9e-117 425.2 376 59.8
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 1.9e-116 423.3 365 60.3
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.4e-116 421.8 365 60.0
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 5.4e-116 421.8 366 59.6
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 1.0e-114 417.5 371 60.4
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 1.7e-114 416.8 378 57.4
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 3.0e-114 416.0 371 57.4
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 1.9e-113 413.3 361 58.2
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.9e-113 413.3 372 57.0
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 2.5e-113 412.9 372 58.9
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 3.3e-113 412.5 365 61.9
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 8.1e-112 407.9 371 58.8
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 3.1e-111 406.0 371 58.5
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 5.3e-111 405.2 368 57.6
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 5.3e-111 405.2 368 57.6
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 5.3e-111 405.2 370 59.2
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 5.3e-111 405.2 375 56.3
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 4.4e-110 402.1 373 56.6
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 9.9e-110 401.0 372 58.6
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 3.8e-109 399.1 371 59.6
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 6.4e-109 398.3 369 55.6
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 1.1e-108 397.5 367 55.9
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 5.4e-108 395.2 375 55.5
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 1.6e-107 393.7 369 54.7
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 2.1e-107 393.3 361 55.1
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 2.1e-107 393.3 369 54.7
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 2.7e-107 392.9 371 58.5
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 6.0e-107 391.7 369 54.2
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 7.8e-107 391.3 368 54.6
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.0e-106 391.0 372 56.5
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 1.3e-106 390.6 363 55.1
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 2.3e-106 389.8 365 55.9
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 5.1e-106 388.7 370 57.6
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 1.1e-105 387.5 374 54.3
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 3.3e-105 386.0 371 55.5
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 4.8e-104 382.1 370 56.8
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.4e-103 380.6 367 54.8
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.4e-103 379.8 372 54.3
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 3.1e-103 379.4 325 63.4
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 3.1e-103 379.4 369 56.6
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 6.9e-103 378.3 372 53.2
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.0e-102 376.7 384 51.8
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 2.6e-102 376.3 371 53.9
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 3.4e-102 375.9 368 53.8
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 4.5e-102 375.6 363 53.2
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 4.5e-102 375.6 365 53.4
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 2.9e-101 372.9 374 53.2
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 4.9e-101 372.1 367 52.9
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 6.4e-101 371.7 366 56.0
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 6.4e-101 371.7 388 53.6
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 6.4e-101 371.7 367 53.1
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 3.2e-100 369.4 367 52.9
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 1.2e-99 367.5 367 53.1
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 7.9e-99 364.8 374 52.9
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 1.0e-98 364.4 365 52.3
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 1.0e-98 364.4 367 53.1
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 1.3e-98 364.0 367 52.0
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 1.8e-98 363.6 367 52.6
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 5.1e-98 362.1 367 52.9
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 6.7e-98 361.7 406 50.5
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 8.7e-98 361.3 364 53.6
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 8.7e-98 361.3 370 53.0
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 3.3e-97 359.4 382 51.6
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 1.4e-95 354.0 393 48.9
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 2.4e-95 353.2 486 44.2
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 4.0e-95 352.4 363 51.5
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 5.3e-95 352.1 364 52.2
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 2.6e-94 349.7 331 53.8
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 7.6e-94 348.2 317 60.6
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 1.7e-93 347.1 316 58.9
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 3.8e-93 345.9 400 48.5
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 6.4e-93 345.1 366 52.5
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 8.4e-93 344.7 406 48.3
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 3.2e-92 342.8 508 41.9
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 4.2e-92 342.4 365 50.1
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 7.1e-92 341.7 366 49.7
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.2e-91 340.9 374 50.3
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 1.6e-91 340.5 365 50.7
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 2.1e-91 340.1 363 50.7
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 1.0e-90 337.8 366 49.2
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 1.8e-90 337.0 363 50.1
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 5.1e-90 335.5 369 48.8
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 5.1e-90 335.5 372 50.3
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 1.9e-89 333.6 373 48.3
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 3.3e-89 332.8 376 48.4
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 4.3e-89 332.4 360 50.6
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 7.4e-89 331.6 354 50.8
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 9.6e-89 331.3 313 57.2
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 9.6e-89 331.3 365 49.6
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 8.2e-88 328.2 317 56.8
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 1.1e-87 327.8 296 56.4
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 3.1e-87 326.2 367 48.8
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 4.0e-87 325.9 280 65.4
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 1.2e-86 324.3 364 47.0
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 2.0e-86 323.6 349 50.7
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 2.6e-86 323.2 353 49.9
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 5.8e-86 322.0 287 55.4
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.3e-85 320.9 350 50.3
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 5.5e-84 315.5 367 47.7
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 7.1e-84 315.1 565 38.8
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 2.3e-82 310.1 355 50.1
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 6.9e-79 298.5 372 44.9
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 5.9e-78 295.4 312 54.2
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 4.8e-72 275.8 478 36.2
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 6.5e-69 265.4 209 63.6
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 2.5e-68 263.5 296 49.7
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.2e-67 261.2 211 63.5
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.1e-63 248.1 211 61.1
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 1.0e-61 241.5 313 46.0
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 2.9e-61 240.0 209 57.4
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 5.0e-61 239.2 171 70.2
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 5.0e-61 239.2 214 56.1
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 6.5e-61 238.8 340 41.5
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.6e-57 226.9 169 66.9
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 5.7e-57 225.7 169 66.3
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 7.4e-57 225.3 312 44.6
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.7e-56 224.2 169 66.3
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.8e-56 223.4 213 55.9
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 4.8e-56 222.6 206 57.3
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 8.2e-56 221.9 213 56.3
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 8.2e-56 221.9 165 66.1
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.1e-55 221.5 172 64.5
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 9.1e-55 218.4 165 66.1
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 9.1e-55 218.4 315 38.7
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 1.0e-53 214.9 378 34.7
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 4.2e-52 209.5 375 35.7
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 1.4e-50 204.5 377 33.2
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 3.0e-50 203.4 381 34.6
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 5.2e-50 202.6 169 61.5
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 1.5e-49 201.1 381 34.6
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 6.5e-45 185.7 156 59.6
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 2.5e-44 183.7 259 41.7
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 4.2e-44 183.0 190 54.7
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 3.4e-41 173.3 369 31.4
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 9.8e-41 171.8 370 32.4
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.7e-40 171.0 130 64.6
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 1.4e-39 167.9 202 43.1
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.0e-39 165.6 110 76.4
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 3.3e-36 156.8 153 56.2
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 3.3e-36 156.8 123 61.0
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 9.8e-33 145.2 164 49.4
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 4.9e-32 142.9 161 46.6
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 6.3e-32 142.5 161 46.6
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 2.9e-29 133.7 126 51.6
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 1.7e-24 117.9 138 44.9
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 8.3e-24 115.5 173 40.5
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 3.9e-21 106.7 136 42.6
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 1.2e-19 101.7 136 40.4
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 7.5e-17 92.4 254 27.2
arahy.Tifrunner.gnm1.ann1.C5B8HT Arachis hypogaea HOM05D002209 ORTHO05D004761 5.6e-12 76.3 48 77.1
AagrBONN_evm.TU.Sc2ySwM_368.2096 Anthoceros agrestis HOM05D002209 ORTHO05D004761 3.6e-11 73.6 232 26.3


User provided reference genes

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