Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 2.6e-69 265.4 146 100.0
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 2.1e-58 229.2 147 88.4
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 1.4e-51 206.5 156 75.6
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 3.9e-49 198.4 152 73.7
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.6e-42 176.4 109 83.5
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 2.7e-42 175.6 119 77.3
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 2.3e-41 172.6 147 66.0
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.8e-38 162.9 128 66.4
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 1.2e-37 160.2 108 75.0
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 3.4e-37 158.7 107 73.8
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 5.9e-37 157.9 107 75.7
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 5.9e-37 157.9 107 74.8
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 1.0e-36 157.1 107 72.9
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 1.7e-36 156.4 134 62.7
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.7e-36 156.4 107 73.8
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 2.2e-36 156.0 108 72.2
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 2.9e-36 155.6 107 74.8
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 5.0e-36 154.8 108 69.4
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 5.0e-36 154.8 106 70.8
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 1.1e-35 153.7 107 72.0
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.1e-35 153.7 106 72.6
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 1.4e-35 153.3 107 72.9
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 1.4e-35 153.3 127 64.6
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 1.9e-35 152.9 127 63.8
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 1.9e-35 152.9 106 71.7
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.9e-35 152.9 105 73.3
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 2.5e-35 152.5 106 70.8
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 3.2e-35 152.1 107 74.8
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 3.2e-35 152.1 107 71.0
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 3.2e-35 152.1 106 72.6
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 4.2e-35 151.8 106 72.6
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 4.2e-35 151.8 106 72.6
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 4.2e-35 151.8 106 72.6
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 5.5e-35 151.4 133 60.2
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 5.5e-35 151.4 134 60.4
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 5.5e-35 151.4 107 71.0
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 5.5e-35 151.4 106 72.6
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 9.4e-35 150.6 132 60.6
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 9.4e-35 150.6 106 68.9
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 1.2e-34 150.2 108 69.4
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 1.2e-34 150.2 108 68.5
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.6e-34 149.8 107 70.1
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 3.6e-34 148.7 106 68.9
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 3.6e-34 148.7 108 66.7
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 7.9e-34 147.5 129 62.8
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 1.0e-33 147.1 131 61.1
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 1.4e-33 146.7 129 62.0
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 1.4e-33 146.7 107 69.2
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 1.8e-33 146.4 106 69.8
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 1.8e-33 146.4 117 66.7
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.8e-33 146.4 131 58.8
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 5.1e-33 144.8 107 69.2
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 5.1e-33 144.8 133 57.9
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 1.9e-32 142.9 107 66.4
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 3.3e-32 142.1 132 56.1
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 5.7e-32 141.4 106 64.2
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 5.7e-32 141.4 105 66.7
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.4e-32 141.0 149 55.0
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.4e-32 141.0 149 55.0
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 9.7e-32 140.6 130 58.5
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 1.7e-31 139.8 106 65.1
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 2.8e-31 139.0 99 69.7
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 3.7e-31 138.7 106 64.2
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 3.7e-31 138.7 106 64.2
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 4.8e-31 138.3 142 52.8
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 4.8e-31 138.3 142 52.8
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 6.3e-31 137.9 104 65.4
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 6.3e-31 137.9 87 78.2
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 8.2e-31 137.5 105 63.8
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 1.1e-30 137.1 111 67.6
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 1.1e-30 137.1 111 67.6
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 1.1e-30 137.1 105 64.8
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 1.4e-30 136.7 105 63.8
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 1.4e-30 136.7 105 63.8
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 1.4e-30 136.7 142 50.7
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.4e-30 136.7 142 50.7
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 1.4e-30 136.7 105 63.8
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 1.4e-30 136.7 142 50.7
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 1.4e-30 136.7 142 51.4
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 1.8e-30 136.3 105 63.8
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 1.8e-30 136.3 142 51.4
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.5e-29 133.3 121 57.9
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 8.5e-28 127.5 109 60.6
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 1.4e-27 126.7 89 67.4
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 1.9e-27 126.3 87 71.3
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.9e-27 126.3 87 72.4
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 1.9e-27 126.3 104 61.5
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 1.9e-27 126.3 87 72.4
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 3.2e-27 125.6 108 58.3
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 3.2e-27 125.6 88 68.2
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 5.5e-27 124.8 87 71.3
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 5.5e-27 124.8 87 71.3
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 1.2e-26 123.6 126 55.6
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 2.1e-26 122.9 120 54.2
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 2.7e-26 122.5 132 51.5
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 6.1e-26 121.3 87 70.1
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 6.1e-26 121.3 87 70.1
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 1.8e-25 119.8 86 67.4
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 3.9e-25 118.6 105 58.1
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 3.7e-23 112.1 87 60.9
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 8.2e-23 110.9 79 69.6
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 1.3e-20 103.6 108 52.8
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.3e-20 103.6 126 46.8
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 2.9e-20 102.4 83 59.0
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 3.8e-20 102.1 90 62.2
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 6.5e-20 101.3 72 69.4
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 6.5e-20 101.3 109 50.5
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 1.4e-19 100.1 72 66.7
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 9.4e-19 97.4 103 46.6
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 4.7e-18 95.1 118 47.5
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 6.1e-18 94.7 64 68.8
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.8e-17 93.2 72 61.1
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 6.7e-17 91.3 103 39.8
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 1.4e-14 83.6 64 65.6
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 1.8e-14 83.2 84 47.6
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 3.5e-13 79.0 89 51.7
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 3.5e-13 79.0 59 61.0
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 2.2e-12 76.3 82 48.8
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 8.5e-12 74.3 55 65.5
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.1e-11 73.9 122 40.2
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 6.1e-10 68.2 56 58.9
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 6.1e-10 68.2 72 47.2
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 6.1e-10 68.2 72 47.2
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 1.0e-09 67.4 43 72.1
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 3.0e-09 65.9 62 58.1
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 4.0e-09 65.5 62 58.1
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 5.2e-09 65.1 57 54.4
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 4.1e-06 55.5 42 64.3
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 4.1e-06 55.5 42 64.3


User provided reference genes

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