Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 2.5e-229 798.5 429 100.0
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 4.3e-136 488.8 527 59.8
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 7.5e-125 451.4 533 56.8
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 5.1e-121 438.7 525 52.4
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 2.6e-109 399.8 398 63.8
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 1.3e-100 370.9 421 59.1
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 7.4e-88 328.6 459 50.3
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 5.9e-45 186.0 436 41.5
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 8.0e-42 175.6 444 35.4
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 1.7e-36 157.9 622 29.1
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 8.8e-33 145.6 400 35.0
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 4.5e-29 133.3 449 30.5
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 6.3e-23 112.8 229 38.0
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 2.4e-22 110.9 375 37.1
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 3.2e-22 110.5 169 41.4
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 3.5e-21 107.1 283 35.3
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 5.9e-21 106.3 240 35.4
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 5.9e-21 106.3 310 31.0
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 1.5e-19 101.7 296 30.7
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 9.5e-19 99.0 235 36.2
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 3.6e-18 97.1 189 42.9
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 1.2e-13 82.0 280 27.9
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 1.6e-13 81.6 268 28.7
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 2.0e-13 81.3 171 33.9
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 2.3e-12 77.8 292 28.1
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 5.6e-11 73.2 281 27.0
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 7.3e-11 72.8 276 29.3
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 2.1e-10 71.2 266 29.3
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 4.7e-10 70.1 286 26.2
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 1.1e-09 68.9 261 26.8
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 2.2e-07 61.2 272 26.1
Aqoxy5G00188 Aquilegia oxysepala HOM05D008213 ORTHO05D009787 7.1e-06 56.2 222 27.5
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 7.1e-06 56.2 209 25.8
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 7.1e-06 56.2 209 23.9


User provided reference genes

Program Settings