Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1261 Trifolium pratense HOM05D015770 ORTHO05D015815 3.6e-140 501.9 314 100.0
DCAR_028795 Daucus carota HOM05D015770 ORTHO05D015815 1.6e-44 184.1 166 59.0
TPR.G34425 Trifolium pratense HOM05D015770 ORTHO05D023171 1.4e-24 117.9 69 82.6
arahy.Tifrunner.gnm1.ann1.ML4SS4 Arachis hypogaea HOM05D000454 ORTHO05D007581 3.3e-21 106.7 62 82.3
SHI04319 Sapria himalayana HOM05D000454 ORTHO05D007581 1.4e-19 101.3 74 63.5
Glyma.07G169500 Glycine max HOM05D000454 ORTHO05D007581 1.8e-19 100.9 65 78.5
ClCG01G006560 Citrullus lanatus HOM05D000454 ORTHO05D007581 4.1e-19 99.8 61 75.4
Gohir.D01G140175 Gossypium hirsutum HOM05D000454 ORTHO05D036153 1.3e-17 94.7 65 66.2
EL10Ac6g14115 Beta vulgaris HOM05D000454 ORTHO05D007581 2.1e-15 87.4 61 67.2
THA.LOC104805939 Tarenaya hassleriana HOM05D000454 ORTHO05D007581 2.1e-15 87.4 64 67.2
Potri.010G106800 Populus trichocarpa HOM05D000454 ORTHO05D007581 3.6e-15 86.7 51 80.4
TAR371G0605 Trochodendron aralioides HOM05D000454 ORTHO05D007581 4.7e-15 86.3 55 72.7
TAR629G1112 Trochodendron aralioides HOM05D000454 ORTHO05D007581 1.0e-14 85.1 57 71.9
ATR0753G008 Amborella trichopoda HOM05D000454 ORTHO05D007581 6.7e-14 82.4 54 68.5
Gohir.A01G147100 Gossypium hirsutum HOM05D000454 ORTHO05D007581 6.7e-14 82.4 57 66.7
Gohir.D04G185900 Gossypium hirsutum HOM05D000454 ORTHO05D007581 2.0e-13 80.9 58 63.8
TPR.G20758 Trifolium pratense HOM05D000454 ORTHO05D023171 4.4e-13 79.7 44 88.6
CANSAT01G3250 Cannabis sativa HOM05D000454 ORTHO05D007581 1.3e-12 78.2 52 69.2
Dinv07732 Davidia involucrata HOM05D000454 ORTHO05D007581 1.8e-11 74.3 50 68.0
Os02g0735700 Oryza sativa ssp. japonica HOM05D000454 ORTHO05D007581 7.0e-11 72.4 51 66.7
Peaxi162Scf00655g00122 Petunia axillaris HOM05D000454 ORTHO05D007581 5.9e-10 69.3 44 70.5
TPR.G24756 Trifolium pratense HOM05D015770 ORTHO05D036153 7.7e-10 68.9 37 91.9
AUR62011850 Chenopodium quinoa HOM05D015770 ORTHO05D015815 6.1e-07 59.3 176 30.7
AUR62044040 Chenopodium quinoa HOM05D015770 ORTHO05D015815 6.7e-06 55.8 160 29.4
AUR62006472 Chenopodium quinoa HOM05D015770 ORTHO05D015815 8.8e-06 55.5 171 28.1
AUR62038472 Chenopodium quinoa HOM05D000454 ORTHO05D007581 8.8e-06 55.5 32 75.0


User provided reference genes

Program Settings