Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 1.3e-182 642.9 320 100.0
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 1.8e-139 499.6 314 81.8
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 8.6e-134 480.7 315 81.0
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 4.8e-116 421.8 315 71.1
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 7.1e-112 407.9 255 82.4
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 1.8e-110 403.3 323 66.9
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 5.1e-110 401.7 334 65.9
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 2.0e-106 389.8 323 65.9
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 5.5e-96 355.1 321 62.0
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 1.6e-95 353.6 382 53.9
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.5e-90 337.0 359 55.4
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.8e-84 316.2 319 57.1
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 4.4e-77 292.4 325 55.4
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 8.8e-70 268.1 320 50.3
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 1.1e-67 261.2 324 50.0
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 2.7e-66 256.5 329 49.5
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.0e-65 254.6 319 48.9
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 8.5e-65 251.5 318 48.7
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.9e-64 250.4 338 46.7
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 3.6e-63 246.1 325 47.1
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 4.7e-63 245.7 324 46.9
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 1.0e-62 244.6 335 46.9
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 1.4e-62 244.2 338 46.4
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 8.8e-62 241.5 338 45.0
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 4.4e-61 239.2 332 47.3
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 2.2e-60 236.9 337 46.3
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.8e-60 236.5 351 44.7
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 4.1e-59 232.6 339 45.1
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 5.0e-57 225.7 328 44.2
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 2.5e-56 223.4 375 40.3
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 2.1e-55 220.3 333 44.4
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 3.6e-55 219.5 306 44.8
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 4.7e-55 219.2 288 46.2
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.1e-55 218.8 356 42.4
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 6.1e-55 218.8 377 39.8
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 8.0e-55 218.4 344 41.9
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.0e-54 218.0 301 45.2
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.0e-54 218.0 344 43.0
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.8e-54 217.2 306 45.1
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 2.3e-54 216.9 247 51.0
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 3.0e-54 216.5 206 59.2
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 6.8e-54 215.3 243 49.0
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 8.8e-54 214.9 229 54.1
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 8.8e-54 214.9 303 43.2
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.2e-53 214.5 229 54.1
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 1.2e-53 214.5 288 45.5
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 1.5e-53 214.2 232 51.7
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 3.4e-53 213.0 186 60.8
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 3.4e-53 213.0 227 55.9
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 4.4e-53 212.6 175 61.1
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 7.5e-53 211.8 277 45.5
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 9.8e-53 211.5 191 57.6
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.3e-52 211.1 317 43.5
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 2.2e-52 210.3 170 63.5
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 4.9e-52 209.1 208 57.2
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 1.1e-51 208.0 330 43.0
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.8e-51 207.2 362 37.6
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 7.0e-51 205.3 303 42.9
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.6e-50 204.1 217 52.5
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 2.0e-50 203.8 331 39.0
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 3.5e-50 203.0 161 62.1
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 3.5e-50 203.0 253 45.1
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 1.7e-49 200.7 170 60.0
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 2.9e-49 199.9 227 44.9
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.8e-49 199.5 197 54.3
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 3.8e-49 199.5 320 41.2
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 6.6e-49 198.7 210 52.9
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 6.6e-49 198.7 255 47.1
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 8.6e-49 198.4 227 45.4
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.1e-48 198.0 197 53.8
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.9e-48 197.2 254 43.7
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.5e-48 196.8 287 41.1
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 3.3e-48 196.4 172 54.7
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 7.3e-48 195.3 205 55.1
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 9.5e-48 194.9 191 54.5
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 9.5e-48 194.9 195 53.8
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 2.8e-47 193.4 331 38.7
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 2.8e-47 193.4 227 48.9
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 3.6e-47 193.0 251 41.8
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 3.6e-47 193.0 227 43.6
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 3.6e-47 193.0 213 50.2
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 4.7e-47 192.6 230 44.3
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 6.1e-47 192.2 160 58.8
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 8.0e-47 191.8 227 44.9
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 8.0e-47 191.8 210 46.7
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.0e-46 191.4 168 59.5
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 2.3e-46 190.3 169 53.8
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 6.8e-46 188.7 267 43.4
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 1.2e-45 188.0 199 51.3
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 7.5e-45 185.3 162 58.0
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.3e-44 184.5 188 53.2
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 4.9e-44 182.6 221 46.2
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 2.4e-43 180.3 243 40.3
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 4.1e-43 179.5 326 38.3
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.3e-41 174.5 159 59.7
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 5.6e-40 169.1 118 71.2
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 7.5e-37 158.7 206 45.1
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 6.4e-36 155.6 263 41.4
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 7.8e-34 148.7 165 54.5
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.3e-33 147.9 228 43.0
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 2.8e-31 140.2 204 38.2
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 1.2e-29 134.8 272 32.7
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 4.9e-28 129.4 238 33.6
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 1.7e-25 120.9 117 48.7
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 2.4e-22 110.5 170 34.1
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 3.2e-19 100.1 80 62.5
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 4.4e-13 79.7 184 26.6
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 2.9e-12 77.0 92 42.4
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 5.6e-08 62.8 215 28.4


User provided reference genes

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