Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 2.0e-116 422.5 234 100.0
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 1.3e-86 323.6 231 80.1
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 3.8e-86 322.0 210 84.3
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 1.5e-74 283.5 227 71.8
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 4.8e-73 278.5 237 69.2
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 2.4e-72 276.2 197 78.2
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 3.1e-72 275.8 214 75.2
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 6.7e-67 258.1 228 64.0
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 7.4e-66 254.6 200 70.5
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 2.6e-63 246.1 229 62.4
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 1.3e-62 243.8 239 60.3
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 2.8e-57 226.1 201 64.7
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 3.1e-56 222.6 221 59.3
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.1e-56 222.2 214 58.4
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 9.0e-56 221.1 220 60.9
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 2.0e-55 219.9 187 64.7
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 2.0e-55 219.9 196 63.3
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 4.5e-55 218.8 190 63.2
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 5.9e-55 218.4 189 66.7
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 5.9e-55 218.4 218 58.3
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 7.6e-55 218.0 182 68.1
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 1.7e-54 216.9 188 66.0
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 5.0e-54 215.3 228 57.0
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 5.0e-54 215.3 225 55.6
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 5.0e-54 215.3 234 53.8
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 6.5e-54 214.9 201 59.7
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 8.5e-54 214.5 194 61.9
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 1.1e-53 214.2 204 59.8
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.9e-53 213.4 236 53.4
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 3.2e-53 212.6 190 61.1
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 4.2e-53 212.2 190 61.1
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 4.2e-53 212.2 226 55.3
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 4.2e-53 212.2 239 57.7
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 5.5e-53 211.8 194 60.8
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 5.5e-53 211.8 183 66.1
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.2e-52 210.7 198 60.1
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 1.6e-52 210.3 190 63.7
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 2.1e-52 209.9 229 56.3
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 6.1e-52 208.4 202 56.4
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 6.1e-52 208.4 192 63.0
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 7.9e-52 208.0 229 52.8
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 3.0e-51 206.1 189 62.4
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 3.0e-51 206.1 213 55.4
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 3.9e-51 205.7 203 59.6
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 1.5e-50 203.8 197 59.4
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 1.5e-50 203.8 233 52.8
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 7.4e-50 201.4 182 63.2
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.7e-50 201.1 235 52.8
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 1.3e-49 200.7 205 58.0
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.3e-49 200.7 207 58.9
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 3.7e-49 199.1 223 54.7
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 4.8e-49 198.7 225 55.1
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 8.2e-49 198.0 229 55.5
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 4.1e-48 195.7 183 57.9
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 4.1e-48 195.7 245 48.2
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 5.3e-48 195.3 185 61.1
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 6.9e-48 194.9 223 54.3
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 1.2e-47 194.1 182 60.4
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.2e-47 194.1 228 52.6
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 1.5e-47 193.7 223 53.8
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.5e-47 193.7 190 58.9
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 2.0e-47 193.4 187 62.0
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 2.0e-47 193.4 202 53.5
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 2.0e-47 193.4 205 56.1
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 3.4e-47 192.6 222 50.9
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 4.5e-47 192.2 287 47.7
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 1.0e-46 191.0 191 57.6
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 1.7e-46 190.3 191 58.6
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 3.8e-46 189.1 229 49.3
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 3.8e-46 189.1 191 58.6
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 1.1e-45 187.6 222 50.9
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 1.1e-45 187.6 215 53.5
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.4e-45 187.2 223 51.1
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 1.9e-45 186.8 241 46.5
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.2e-45 186.0 190 57.9
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 4.2e-45 185.7 158 64.6
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.5e-45 185.3 190 56.3
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 5.5e-45 185.3 182 60.4
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 7.2e-45 184.9 229 53.3
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 2.1e-44 183.3 213 53.5
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 2.1e-44 183.3 228 49.6
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 3.6e-44 182.6 190 57.9
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 7.9e-44 181.4 172 61.6
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 1.0e-43 181.0 182 56.6
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.8e-43 180.3 190 57.4
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 1.8e-43 180.3 192 55.7
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 1.8e-43 180.3 200 54.5
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 3.9e-43 179.1 171 60.8
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 6.7e-43 178.3 177 58.2
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 2.0e-42 176.8 224 49.6
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 5.7e-42 175.3 178 57.3
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 9.7e-42 174.5 187 52.9
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 6.3e-41 171.8 224 49.6
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 1.8e-40 170.2 219 49.8
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 2.4e-40 169.9 158 62.7
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 1.2e-39 167.5 189 55.6
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 1.5e-39 167.2 187 52.9
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 2.6e-39 166.4 211 51.2
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 2.6e-39 166.4 187 49.7
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 5.9e-39 165.2 223 48.4
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 1.3e-38 164.1 207 50.7
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 2.2e-38 163.3 188 53.7
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 2.2e-38 163.3 188 53.7
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 2.9e-38 162.9 218 50.9
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 3.8e-38 162.5 188 51.6
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 8.5e-38 161.4 165 55.2
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 1.1e-37 161.0 194 50.5
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 4.2e-37 159.1 208 47.1
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 3.6e-36 156.0 216 47.7
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 4.7e-36 155.6 207 49.8
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 6.1e-36 155.2 218 47.2
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 1.8e-35 153.7 209 46.4
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 1.1e-34 151.0 205 48.3
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 1.7e-33 147.1 217 47.5
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 2.2e-33 146.7 180 51.7
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 2.2e-33 146.7 180 51.7
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 2.2e-33 146.7 180 51.7
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 5.3e-32 142.1 232 45.7
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 2.0e-31 140.2 189 50.3
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 1.0e-30 137.9 217 46.5
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 5.0e-30 135.6 182 47.8
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 5.0e-30 135.6 103 76.7
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 5.2e-27 125.6 211 42.2
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 5.2e-27 125.6 274 38.3
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 8.8e-27 124.8 187 44.9
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 2.6e-26 123.2 125 56.8
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 4.4e-26 122.5 218 39.9
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 1.7e-25 120.6 215 40.0
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 2.0e-23 113.6 118 53.4
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 7.7e-23 111.7 132 50.8
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 7.7e-23 111.7 182 42.3
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 2.9e-22 109.8 111 55.9
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 3.2e-21 106.3 101 58.4
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 9.4e-21 104.8 89 62.9
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 4.0e-19 99.4 112 55.4
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 8.8e-19 98.2 223 33.2
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 2.8e-17 93.2 81 66.7
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 8.3e-17 91.7 148 39.9
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.2e-15 87.8 108 50.0
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.0e-14 84.7 75 60.0
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 8.6e-14 81.6 85 57.6
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 5.5e-13 79.0 114 48.2
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 1.6e-12 77.4 141 35.5
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 1.8e-11 73.9 210 31.0
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 3.0e-11 73.2 71 53.5
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 8.8e-11 71.6 106 42.5
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 1.5e-10 70.9 79 50.6
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 2.0e-10 70.5 96 44.8
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 1.8e-08 63.9 54 53.7
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.3e-06 57.8 45 60.0


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