Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 1.7e-49 199.1 109 100.0
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 3.2e-32 141.7 114 74.6
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 6.1e-23 110.9 112 63.4
Ca_15536_v3 Cicer arietinum L. HOM05D008210 ORTHO05D010078 8.0e-23 110.5 114 60.5
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 3.8e-17 91.7 114 56.1
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 1.6e-15 86.3 114 53.5
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 6.1e-15 84.3 99 52.5
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 1.4e-14 83.2 109 50.5
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 3.0e-14 82.0 117 52.1
Glyma.06G035100 Glycine max HOM05D008210 ORTHO05D010078 1.1e-11 73.6 115 51.3
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 5.4e-11 71.2 94 45.7
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.2e-10 70.1 78 44.9
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.2e-10 70.1 78 44.9
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 1.2e-10 70.1 108 43.5
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 2.0e-10 69.3 95 45.3
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 3.5e-10 68.6 94 44.7
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 3.5e-10 68.6 84 46.4
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 1.0e-09 67.0 80 48.8
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 2.3e-09 65.9 75 56.0
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 2.3e-09 65.9 76 50.0
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 1.5e-08 63.2 81 46.9
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 4.3e-08 61.6 102 39.2
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 5.6e-08 61.2 105 44.8
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 7.3e-08 60.8 100 44.0
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 7.3e-08 60.8 97 44.3
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.2e-07 60.1 86 40.7
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 1.2e-07 60.1 113 38.9
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 1.2e-07 60.1 95 35.8
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 3.6e-07 58.5 87 40.2
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 8.0e-07 57.4 84 46.4
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 1.1e-06 57.0 87 42.5
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 1.1e-06 57.0 109 39.4
Lalb_Chr08g0245741 Lupinus albus HOM05D008210 ORTHO05D010078 1.1e-06 57.0 80 42.5
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 1.4e-06 56.6 110 43.6
Sed0013073 Sechium edule HOM05D022138 ORTHO05D010078 1.8e-06 56.2 77 45.5
Sc02g0006720 Simmondsia chinensis HOM05D008210 ORTHO05D010078 2.3e-06 55.8 68 44.1
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 3.1e-06 55.5 117 33.3
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 3.1e-06 55.5 101 37.6
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 3.1e-06 55.5 81 42.0
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.0e-06 55.1 57 50.9
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 4.0e-06 55.1 108 38.9
SalBow8G0954 Salvia bowleyana HOM05D008210 ORTHO05D010078 5.2e-06 54.7 65 47.7
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 6.8e-06 54.3 104 43.3
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 8.9e-06 53.9 105 37.1
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 8.9e-06 53.9 87 44.8
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 8.9e-06 53.9 93 46.2


User provided reference genes

Program Settings