Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12334 Trifolium pratense HOM05D016095 ORTHO05D001848 5.3e-117 424.5 229 100.0
Psat0s3779g0120 Pisum sativum HOM05D016095 ORTHO05D001848 2.6e-39 166.4 149 70.5
Medtr3g110590 Medicago truncatula HOM05D016095 ORTHO05D001848 1.6e-36 157.1 150 64.7
Lj1g0021910 Lotus japonicus HOM05D016095 ORTHO05D001848 1.2e-23 114.4 157 51.0
Glyma.06G089300 Glycine max HOM05D016095 ORTHO05D029748 2.8e-17 93.2 166 50.0
Lalb_Chr11g0064641 Lupinus albus HOM05D016095 ORTHO05D001848 1.2e-12 77.8 169 36.7
CiPaw.07G201100 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.9e-10 70.5 180 38.3
Haze_21939 Corylus avellana HOM05D002243 ORTHO05D001848 2.5e-10 70.1 183 36.6
Manes.05G185500 Manihot esculenta HOM05D002243 ORTHO05D001848 4.8e-09 65.9 134 38.1
Prupe.1G544100 Prunus persica HOM05D002243 ORTHO05D001848 4.8e-09 65.9 44 65.9
CiPaw.08G028200 Carya illinoinensis HOM05D002243 ORTHO05D001848 3.1e-08 63.2 120 35.0
Dinv01223 Davidia involucrata HOM05D002243 ORTHO05D001848 3.1e-08 63.2 136 35.3
Eucgr.F02202 Eucalyptus grandis HOM05D002243 ORTHO05D001848 5.3e-08 62.4 91 40.7
QL12p040753 Quercus lobata HOM05D002243 ORTHO05D001848 2.6e-07 60.1 107 36.4
TWI12G1105 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 3.4e-07 59.7 113 35.4
Sabra02G0089100 Salix brachista HOM05D002243 ORTHO05D001848 5.8e-07 58.9 130 32.3
CDE04G0825 Ceratophyllum demersum HOM05D002243 ORTHO05D001848 7.6e-07 58.5 101 32.7
CDE07G0845 Ceratophyllum demersum HOM05D001149 ORTHO05D001848 9.9e-07 58.2 54 42.6
FAN18G0601 Fragaria x ananassa HOM05D002243 ORTHO05D001848 9.9e-07 58.2 97 41.2
QL06p038195 Quercus lobata HOM05D002243 ORTHO05D001848 1.3e-06 57.8 127 34.6
Gorai.003G033900 Gossypium raimondii HOM05D002243 ORTHO05D001848 1.7e-06 57.4 113 38.9
Nn6g34568 Nelumbo nucifera HOM05D002243 ORTHO05D001848 1.7e-06 57.4 44 56.8
RcHm_v2.0_Chr7g0232141 Rosa chinensis HOM05D002243 ORTHO05D001848 1.7e-06 57.4 46 56.5
Aqoxy5G01944 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 2.2e-06 57.0 44 56.8
Dinv44914 Davidia involucrata HOM05D002243 ORTHO05D001848 2.2e-06 57.0 135 33.3
Os03g0726400 Oryza sativa ssp. japonica HOM05D034594 ORTHO05D001848 2.2e-06 57.0 72 40.3
Gohir.A02G148100 Gossypium hirsutum HOM05D002243 ORTHO05D001848 2.9e-06 56.6 113 38.1
FvH4_5g33410 Fragaria vesca HOM05D002243 ORTHO05D001848 3.8e-06 56.2 46 56.5
Lsat_1_v5_gn_6_108800 Lactuca sativa HOM05D002243 ORTHO05D001848 3.8e-06 56.2 130 31.5
PGR031G0180 Punica granatum HOM05D002243 ORTHO05D001848 3.8e-06 56.2 44 56.8
Atru.chr13.906 Acer truncatum HOM05D002243 ORTHO05D001848 4.9e-06 55.8 117 33.3
Manes.12G119100 Manihot esculenta HOM05D002243 ORTHO05D001848 4.9e-06 55.8 71 42.3
Thecc.01G079600 Theobroma cacao HOM05D002243 ORTHO05D001848 4.9e-06 55.8 118 37.3
Duzib147G0075 Durio zibethinus HOM05D002243 ORTHO05D001848 6.4e-06 55.5 94 40.4
Gohir.D03G032300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 6.4e-06 55.5 113 38.1
Lalb_Chr05g0220451 Lupinus albus HOM05D002243 ORTHO05D001848 6.4e-06 55.5 99 36.4
MBI16_g31808_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 6.4e-06 55.5 44 52.3
MD15G1395300 Malus domestica HOM05D002243 ORTHO05D001848 6.4e-06 55.5 168 35.1
Zm00001eb055870 Zea mays HOM05D034594 ORTHO05D001848 6.4e-06 55.5 104 37.5
CiPaw.07G039400 Carya illinoinensis HOM05D002243 ORTHO05D001848 8.4e-06 55.1 125 33.6
COL.COLO4_35368 Corchorus olitorius HOM05D002243 ORTHO05D001848 8.4e-06 55.1 165 33.9
Oeu059798.2 Olea europaea HOM05D002243 ORTHO05D001848 8.4e-06 55.1 44 54.5


User provided reference genes

Program Settings