Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12324 Trifolium pratense HOM05D000439 ORTHO05D002302 1.6e-29 132.1 69 100.0
TPR.G33824 Trifolium pratense HOM05D000439 ORTHO05D002302 5.2e-20 100.5 64 82.8
TPR.G11570 Trifolium pratense HOM05D000439 ORTHO05D002302 3.8e-18 94.4 68 73.5
Medtr2g091370 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-17 92.8 67 73.1
Medtr3g110385 Medicago truncatula HOM05D000439 ORTHO05D002302 7.1e-17 90.1 64 73.4
TPR.G32660 Trifolium pratense HOM05D000439 ORTHO05D002302 7.1e-17 90.1 70 74.3
TPR.G9133 Trifolium pratense HOM05D000439 ORTHO05D002302 1.2e-16 89.4 60 83.3
Medtr2g010420 Medicago truncatula HOM05D000439 ORTHO05D002302 1.0e-15 86.3 64 71.9
Medtr2g093010 Medicago truncatula HOM05D000439 ORTHO05D002302 8.7e-15 83.2 59 74.6
TPR.G20713 Trifolium pratense HOM05D000439 ORTHO05D002302 1.1e-14 82.8 72 63.9
Medtr2g090980 Medicago truncatula HOM05D000439 ORTHO05D002302 1.5e-14 82.4 64 70.3
Medtr2g091335 Medicago truncatula HOM05D000439 ORTHO05D002302 1.9e-14 82.0 69 63.8
TPR.G20709 Trifolium pratense HOM05D000439 ORTHO05D002302 1.9e-14 82.0 67 62.7
Medtr2g091250 Medicago truncatula HOM05D000439 ORTHO05D002302 3.3e-14 81.3 64 64.1
Medtr2g091080 Medicago truncatula HOM05D000439 ORTHO05D002302 4.3e-14 80.9 69 60.9
Medtr2g091290 Medicago truncatula HOM05D000439 ORTHO05D002302 4.3e-14 80.9 64 67.2
Psat5g275960 Pisum sativum HOM05D000439 ORTHO05D002302 4.3e-14 80.9 64 67.2
TPR.G12457 Trifolium pratense HOM05D000439 ORTHO05D002302 4.3e-14 80.9 67 70.1
Medtr2g103620 Medicago truncatula HOM05D000439 ORTHO05D002302 7.3e-14 80.1 71 59.2
TPR.G11525 Trifolium pratense HOM05D000439 ORTHO05D002302 1.6e-13 79.0 64 64.1
Medtr2g091025 Medicago truncatula HOM05D000439 ORTHO05D002302 2.1e-13 78.6 64 64.1
Medtr2g091030 Medicago truncatula HOM05D000439 ORTHO05D002302 4.8e-13 77.4 64 64.1
Medtr2g091240 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-12 76.3 64 62.5
Medtr2g091285 Medicago truncatula HOM05D000439 ORTHO05D002302 1.1e-12 76.3 67 64.2
TPR.G20706 Trifolium pratense HOM05D000439 ORTHO05D002302 1.1e-12 76.3 64 60.9
Medtr2g091070 Medicago truncatula HOM05D000439 ORTHO05D002302 1.8e-12 75.5 64 62.5
Medtr2g091105 Medicago truncatula HOM05D000439 ORTHO05D002302 1.8e-12 75.5 67 59.7
Lj3g0018557 Lotus japonicus HOM05D000439 ORTHO05D002302 2.4e-12 75.1 64 64.1
Ca_01454_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 3.1e-12 74.7 64 60.9
Medtr2g091260 Medicago truncatula HOM05D000439 ORTHO05D002302 3.1e-12 74.7 64 62.5
Psat0s1858g0280 Pisum sativum HOM05D000439 ORTHO05D002302 3.1e-12 74.7 64 60.9
TPR.G11522 Trifolium pratense HOM05D000439 ORTHO05D002302 3.1e-12 74.7 64 60.9
TPR.G11624 Trifolium pratense HOM05D000439 ORTHO05D002302 3.1e-12 74.7 70 57.1
Lj3g0018169 Lotus japonicus HOM05D000439 ORTHO05D002302 4.0e-12 74.3 64 64.1
TPR.G11256 Trifolium pratense HOM05D000439 ORTHO05D002302 4.0e-12 74.3 52 78.8
TPR.G22517 Trifolium pratense HOM05D000439 ORTHO05D002302 4.0e-12 74.3 64 59.4
Medtr2g091015 Medicago truncatula HOM05D000439 ORTHO05D002302 6.9e-12 73.6 58 65.5
Medtr7g056317 Medicago truncatula HOM05D000439 ORTHO05D002302 9.0e-12 73.2 69 59.4
Medtr2g104190 Medicago truncatula HOM05D000439 ORTHO05D002302 1.2e-11 72.8 62 64.5
TPR.G8900 Trifolium pratense HOM05D000439 ORTHO05D002302 1.2e-11 72.8 65 61.5
TPR.G20707 Trifolium pratense HOM05D000439 ORTHO05D002302 1.5e-11 72.4 64 59.4
Medtr2g091245 Medicago truncatula HOM05D000439 ORTHO05D002302 2.6e-11 71.6 64 59.4
Lj4g0018346 Lotus japonicus HOM05D000439 ORTHO05D002302 3.4e-11 71.2 64 60.9
TPR.G20714 Trifolium pratense HOM05D000439 ORTHO05D002302 3.4e-11 71.2 56 66.1
TPR.G11588 Trifolium pratense HOM05D000439 ORTHO05D002302 5.8e-11 70.5 64 54.7
TPR.G20710 Trifolium pratense HOM05D000439 ORTHO05D002302 7.6e-11 70.1 63 54.0
Medtr2g091110 Medicago truncatula HOM05D000439 ORTHO05D002302 9.9e-11 69.7 64 59.4
Lalb_Chr01g0000841 Lupinus albus HOM05D000439 ORTHO05D002302 1.3e-10 69.3 72 58.3
Psat5g276000 Pisum sativum HOM05D000439 ORTHO05D002302 2.9e-10 68.2 58 63.8
Medtr5g038810 Medicago truncatula HOM05D000439 ORTHO05D002302 4.9e-10 67.4 64 56.2
Medtr6g045183 Medicago truncatula HOM05D000439 ORTHO05D002302 6.4e-10 67.0 64 54.7
Medtr5g078510 Medicago truncatula HOM05D000439 ORTHO05D002302 1.4e-09 65.9 64 56.2
Medtr2g091090 Medicago truncatula HOM05D000439 ORTHO05D002302 4.2e-09 64.3 56 62.5
Ca_20059_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 5.4e-09 63.9 64 56.2
Lalb_Chr14g0367481 Lupinus albus HOM05D000439 ORTHO05D002302 5.4e-09 63.9 70 55.7
Glyma.11G109500 Glycine max HOM05D000439 ORTHO05D002302 7.1e-09 63.5 63 55.6
Psat5g276040 Pisum sativum HOM05D000439 ORTHO05D002302 7.1e-09 63.5 56 57.1
arahy.Tifrunner.gnm1.ann1.824BKL Arachis hypogaea HOM05D000439 ORTHO05D002302 1.2e-08 62.8 67 49.3
arahy.Tifrunner.gnm1.ann1.5F1FKW Arachis hypogaea HOM05D000439 ORTHO05D002302 2.1e-08 62.0 64 54.7
Glyma.12G015800 Glycine max HOM05D000439 ORTHO05D002302 3.5e-08 61.2 59 55.9
Medtr4g046660 Medicago truncatula HOM05D000439 ORTHO05D002302 3.5e-08 61.2 57 63.2
Medtr8g106540 Medicago truncatula HOM05D000439 ORTHO05D002302 4.6e-08 60.8 68 45.6
arahy.Tifrunner.gnm1.ann1.4R5PNE Arachis hypogaea HOM05D008486 ORTHO05D010657 6.0e-08 60.5 64 53.1
arahy.Tifrunner.gnm1.ann1.BZ4NKF Arachis hypogaea HOM05D008486 ORTHO05D010657 6.0e-08 60.5 64 53.1
arahy.Tifrunner.gnm1.ann1.Z2T2IJ Arachis hypogaea HOM05D000439 ORTHO05D002302 6.0e-08 60.5 64 53.1
Medtr8g467200 Medicago truncatula HOM05D000439 ORTHO05D002302 7.9e-08 60.1 66 54.5
RcHm_v2.0_Chr3g0453081 Rosa chinensis HOM05D000439 ORTHO05D002302 2.3e-07 58.5 60 55.0
arahy.Tifrunner.gnm1.ann1.MSPK7M Arachis hypogaea HOM05D000439 ORTHO05D002302 3.0e-07 58.2 67 46.3
Prupe.6G334400 Prunus persica HOM05D000439 ORTHO05D002302 3.0e-07 58.2 56 53.6
CSS0048396 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D002302 6.7e-07 57.0 66 48.5
arahy.Tifrunner.gnm1.ann1.825KYQ Arachis hypogaea HOM05D000439 ORTHO05D002302 8.7e-07 56.6 63 49.2
RcHm_v2.0_Chr7g0237441 Rosa chinensis HOM05D000439 ORTHO05D002302 8.7e-07 56.6 66 45.5
Prupe.6G334600 Prunus persica HOM05D000439 ORTHO05D002302 1.5e-06 55.8 62 46.8
Rhsim07G0176800 Rhododendron simsii HOM05D000439 ORTHO05D002302 1.9e-06 55.5 71 45.1
arahy.Tifrunner.gnm1.ann1.9L902K Arachis hypogaea HOM05D000439 ORTHO05D002302 3.3e-06 54.7 67 47.8
CiPaw.07G011500 Carya illinoinensis HOM05D000439 ORTHO05D002302 3.3e-06 54.7 62 51.6
FAN09G0983 Fragaria x ananassa HOM05D000439 ORTHO05D002302 3.3e-06 54.7 60 50.0
arahy.Tifrunner.gnm1.ann1.8T23IY Arachis hypogaea HOM05D000439 ORTHO05D002302 4.3e-06 54.3 67 46.3
CSS0004188 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D002302 4.3e-06 54.3 66 45.5
FvH4_6g04410 Fragaria vesca HOM05D000439 ORTHO05D002302 4.3e-06 54.3 60 48.3
Dinv26587 Davidia involucrata HOM05D000439 ORTHO05D002302 9.6e-06 53.1 64 46.9
Lj1g0021649 Lotus japonicus HOM05D000439 ORTHO05D002302 9.6e-06 53.1 80 46.2


User provided reference genes

Program Settings