Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 5.9e-52 207.2 103 100.0
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 7.3e-50 200.3 103 96.1
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 7.3e-50 200.3 103 96.1
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 3.4e-47 191.4 103 93.2
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 3.4e-47 191.4 103 93.2
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 1.7e-46 189.1 103 91.3
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 4.9e-46 187.6 103 91.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 3.2e-45 184.9 103 90.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 2.0e-44 182.2 103 85.4
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 3.9e-43 177.9 105 80.0
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 5.0e-43 177.6 103 83.5
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 4.3e-42 174.5 105 77.1
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 2.1e-41 172.2 105 78.1
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 6.2e-41 170.6 100 78.0
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.4e-40 169.5 99 78.8
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.3e-40 168.7 100 76.0
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 4.0e-40 167.9 100 76.0
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.0e-40 167.9 102 79.4
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 4.0e-40 167.9 102 79.4
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 4.0e-40 167.9 102 79.4
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 6.8e-40 167.2 99 76.8
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 6.8e-40 167.2 99 77.8
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 8.9e-40 166.8 105 76.2
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 4.4e-39 164.5 100 76.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 5.8e-39 164.1 106 73.6
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 7.5e-39 163.7 99 77.8
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.7e-38 162.5 99 74.7
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 1.7e-38 162.5 103 73.8
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 2.2e-38 162.2 97 77.3
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 6.4e-38 160.6 96 76.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.4e-37 159.5 102 74.5
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.4e-37 159.5 105 70.5
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.4e-37 159.5 99 74.7
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 2.4e-37 158.7 106 71.7
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 2.4e-37 158.7 95 80.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 4.1e-37 157.9 99 70.7
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 4.1e-37 157.9 99 70.7
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 5.4e-37 157.5 105 72.4
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 7.0e-37 157.1 102 72.5
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 7.0e-37 157.1 98 71.4
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.6e-36 156.0 101 70.3
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-36 155.6 104 71.2
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 2.1e-36 155.6 99 72.7
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.7e-36 155.2 104 70.2
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 4.6e-36 154.5 104 70.2
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.6e-36 154.5 96 72.9
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 4.6e-36 154.5 100 72.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 6.0e-36 154.1 100 72.0
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 6.0e-36 154.1 106 68.9
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 6.0e-36 154.1 106 68.9
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.0e-35 153.3 102 71.6
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 1.0e-35 153.3 99 71.7
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.0e-35 153.3 102 71.6
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.0e-35 153.3 102 71.6
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.3e-35 152.9 101 72.3
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.7e-35 152.5 106 67.9
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.7e-35 152.5 105 69.5
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.3e-35 152.1 100 70.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.3e-35 152.1 100 70.0
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 2.3e-35 152.1 97 70.1
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.3e-35 152.1 100 70.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 3.0e-35 151.8 100 70.0
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 3.0e-35 151.8 102 71.6
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 3.9e-35 151.4 97 70.1
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.9e-35 151.4 96 70.8
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 5.1e-35 151.0 81 92.6
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.5e-34 149.4 108 67.6
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.5e-34 149.4 95 71.6
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.9e-34 149.1 99 70.7
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.9e-34 149.1 97 69.1
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.5e-34 148.7 137 57.7
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 4.3e-34 147.9 80 88.8
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 5.6e-34 147.5 100 69.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 7.3e-34 147.1 101 67.3
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.2e-33 146.4 102 69.6
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 3.6e-33 144.8 103 69.9
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 4.7e-33 144.4 101 70.3
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 6.2e-33 144.1 101 70.3
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 8.1e-33 143.7 96 74.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 8.1e-33 143.7 100 67.0
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 8.1e-33 143.7 104 67.3
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.1e-32 143.3 101 70.3
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 1.1e-32 143.3 101 70.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.4e-32 142.9 104 69.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.4e-32 142.9 102 66.7
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.8e-32 142.5 143 52.4
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.1e-32 141.7 101 70.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 6.8e-32 140.6 90 73.3
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 2.6e-31 138.7 80 81.2
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 4.4e-31 137.9 101 67.3
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 7.5e-31 137.1 90 71.1
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 9.9e-31 136.7 100 64.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 8.3e-30 133.7 87 74.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.4e-29 132.9 86 75.6
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.2e-29 131.7 106 65.1
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 7.1e-29 130.6 80 75.0
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.6e-28 129.4 88 71.6
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 2.3e-27 125.6 88 68.2
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.0e-27 125.2 94 61.7
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.5e-26 122.9 82 72.0
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 3.3e-26 121.7 91 62.6
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 5.2e-24 114.4 82 68.3
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 1.5e-23 112.8 94 55.3
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 7.6e-23 110.5 82 64.6
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 1.3e-22 109.8 89 62.9
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.8e-22 108.2 77 68.8
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.1e-21 106.7 88 54.5
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.6e-20 102.8 71 70.4
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 3.3e-18 95.1 57 73.7
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 2.1e-17 92.4 54 75.9
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 6.2e-17 90.9 71 56.3
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.8e-16 89.4 54 72.2
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.7e-12 75.5 53 73.6
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 7.8e-12 73.9 56 60.7
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 5.6e-10 67.8 53 64.2
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-09 65.1 50 62.0


User provided reference genes

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