Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12192 Trifolium pratense HOM05D006637 ORTHO05D001736 1.1e-214 750.4 555 100.0
Medtr3g025960 Medicago truncatula HOM05D006637 ORTHO05D001736 1.6e-83 314.7 582 40.5
Psat5g203560 Pisum sativum HOM05D006637 ORTHO05D001736 5.2e-71 273.1 567 46.4
Ca_14358_v3 Cicer arietinum L. HOM05D006637 ORTHO05D001736 7.3e-65 252.7 304 55.3
Phvul.009G201900 Phaseolus vulgaris HOM05D006637 ORTHO05D001736 2.0e-46 191.4 270 50.0
Glyma.04G162200 Glycine max HOM05D006637 ORTHO05D001736 2.1e-43 181.4 286 48.6
TPR.G2044 Trifolium pratense HOM05D006637 ORTHO05D001736 4.2e-36 157.1 276 43.5
Ca_21771_v3 Cicer arietinum L. HOM05D006637 ORTHO05D001736 4.6e-35 153.7 274 43.1
Lj4g0016086 Lotus japonicus HOM05D006637 ORTHO05D001736 1.8e-31 141.7 254 41.3
Glyma.06G204000 Glycine max HOM05D006637 ORTHO05D001736 2.2e-29 134.8 551 29.4
Glyma.05G020700 Glycine max HOM05D006637 ORTHO05D001736 8.5e-29 132.9 269 43.1
Lalb_Chr13g0302841 Lupinus albus HOM05D006637 ORTHO05D001736 7.2e-28 129.8 278 42.1
Psat4g068920 Pisum sativum HOM05D006637 ORTHO05D001736 3.6e-27 127.5 250 43.6
Lalb_Chr07g0178311 Lupinus albus HOM05D006637 ORTHO05D001736 4.4e-25 120.6 273 38.1
Atru.chr9.567 Acer truncatum HOM05D006637 ORTHO05D001736 1.3e-24 119.0 275 39.3
Glyma.17G078600 Glycine max HOM05D006637 ORTHO05D001736 1.5e-22 112.1 247 40.9
Medtr4g109570 Medicago truncatula HOM05D006637 ORTHO05D001736 5.9e-22 110.2 214 43.9
VMungo1215G2016 Vigna mungo HOM05D006637 ORTHO05D001736 4.2e-20 104.0 260 35.8
Ciclev10023416m.g Citrus clementina HOM05D006637 ORTHO05D001736 1.4e-18 99.0 279 34.8
Sed0021860 Sechium edule HOM05D006637 ORTHO05D001736 3.3e-17 94.4 249 35.3
Prupe.5G205600 Prunus persica HOM05D006637 ORTHO05D001736 5.7e-17 93.6 290 34.5
Cpa.g.sc10.158 Carica papaya HOM05D006637 ORTHO05D001736 1.3e-16 92.4 271 35.1
Phvul.003G184500 Phaseolus vulgaris HOM05D006637 ORTHO05D001736 2.8e-16 91.3 264 33.3
CsaV3_1G002960 Cucumis sativus L. HOM05D006637 ORTHO05D001736 3.7e-16 90.9 264 33.0
FAN13G0480 Fragaria x ananassa HOM05D006637 ORTHO05D001736 6.3e-16 90.1 284 34.9
Thecc.03G102400 Theobroma cacao HOM05D006637 ORTHO05D001736 1.4e-15 89.0 284 33.5
FAN08G0389 Fragaria x ananassa HOM05D006637 ORTHO05D001736 2.4e-15 88.2 286 34.6
Sed0008450 Sechium edule HOM05D006637 ORTHO05D001736 2.4e-15 88.2 251 34.7
MD06G1225400 Malus domestica HOM05D006637 ORTHO05D001736 4.1e-15 87.4 253 37.5
FAN18G2922 Fragaria x ananassa HOM05D006637 ORTHO05D001736 7.0e-15 86.7 273 34.8
FvH4_5g13780 Fragaria vesca HOM05D006637 ORTHO05D001736 1.6e-14 85.5 273 34.8
MD14G1212300 Malus domestica HOM05D006637 ORTHO05D001736 2.0e-14 85.1 254 37.8
Duzib068G0311 Durio zibethinus HOM05D006637 ORTHO05D001736 3.5e-14 84.3 262 30.5
MELO3C017227.2 Cucumis melo HOM05D006637 ORTHO05D001736 4.5e-14 84.0 279 31.5
RcHm_v2.0_Chr7g0183151 Rosa chinensis HOM05D006637 ORTHO05D001736 2.9e-13 81.3 261 33.7
TAR371G0370 Trochodendron aralioides HOM05D006637 ORTHO05D001736 1.5e-12 79.0 239 33.9
CiPaw.11G054000 Carya illinoinensis HOM05D006637 ORTHO05D001736 2.5e-12 78.2 240 35.4
Cfa019342 Carpinus fangiana HOM05D000824 ORTHO05D003555 2.1e-11 75.1 220 34.5
Manes.06G084300 Manihot esculenta HOM05D006637 ORTHO05D001736 2.7e-11 74.7 276 33.3
Nn3g17457 Nelumbo nucifera HOM05D003787 ORTHO05D001736 2.7e-11 74.7 242 32.6
TWI15G0882 Tripterygium wilfordii HOM05D006637 ORTHO05D001736 2.7e-11 74.7 310 31.3
TWI81G0402 Tripterygium wilfordii HOM05D006637 ORTHO05D001736 2.7e-11 74.7 292 31.5
Potri.015G057200 Populus trichocarpa HOM05D006637 ORTHO05D001736 3.6e-11 74.3 283 33.6
QL10p019649 Quercus lobata HOM05D006637 ORTHO05D001736 4.7e-11 73.9 209 35.9
Nn4g23435 Nelumbo nucifera HOM05D006637 ORTHO05D001736 8.0e-11 73.2 241 34.0
Gohir.D11G036700 Gossypium hirsutum HOM05D006637 ORTHO05D001736 4.0e-10 70.9 286 30.1
Gorai.007G039500 Gossypium raimondii HOM05D006637 ORTHO05D001736 8.8e-10 69.7 286 30.1
Manes.14G086000 Manihot esculenta HOM05D006637 ORTHO05D001736 1.5e-09 68.9 262 30.9
Gohir.A12G182900 Gossypium hirsutum HOM05D006637 ORTHO05D001736 2.0e-09 68.6 267 29.6
Rhsim12G0148600 Rhododendron simsii HOM05D006637 ORTHO05D001736 2.0e-09 68.6 167 38.9
BolC6t38463H Brassica oleracea HOM05D006637 ORTHO05D001736 2.6e-09 68.2 261 30.3
ClCG06G015610 Citrullus lanatus HOM05D006637 ORTHO05D001736 2.6e-09 68.2 241 32.4
PGR083G0945 Punica granatum HOM05D006637 ORTHO05D001736 2.6e-09 68.2 300 29.7
Duzib205G1030 Durio zibethinus HOM05D006637 ORTHO05D001736 3.3e-09 67.8 282 29.8
BcaC08g45599 Brassica carinata HOM05D006637 ORTHO05D001736 4.4e-09 67.4 259 31.7
Haze_07733 Corylus avellana HOM05D006637 ORTHO05D001736 4.4e-09 67.4 169 34.9
COL.COLO4_06852 Corchorus olitorius HOM05D006637 ORTHO05D001736 5.7e-09 67.0 205 34.1
Gorai.008G199400 Gossypium raimondii HOM05D006637 ORTHO05D001736 7.5e-09 66.6 267 29.2
Aqoxy3G00509 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 9.7e-09 66.2 240 31.7
Gohir.D12G186000 Gossypium hirsutum HOM05D006637 ORTHO05D001736 9.7e-09 66.2 267 29.2
Lsat_1_v5_gn_2_90140 Lactuca sativa HOM05D003787 ORTHO05D001736 1.3e-08 65.9 246 31.3
BraA07t30588Z Brassica rapa HOM05D006637 ORTHO05D001736 1.7e-08 65.5 252 31.7
BcaB05g24843 Brassica carinata HOM05D006637 ORTHO05D001736 2.8e-08 64.7 267 30.3
AT1G74220 Arabidopsis thaliana HOM05D006637 ORTHO05D001736 4.8e-08 63.9 273 30.8
Carub.0005s0277 Capsella rubella HOM05D003787 ORTHO05D001736 6.3e-08 63.5 83 45.8
C02p31780 Brassica napus HOM05D006637 ORTHO05D001736 8.2e-08 63.2 262 29.4
Potri.012G061700 Populus trichocarpa HOM05D006637 ORTHO05D001736 8.2e-08 63.2 282 34.8
vmacro16493 Vaccinium macrocarpon HOM05D006637 ORTHO05D001736 8.2e-08 63.2 145 39.3
DCAR_011559 Daucus carota HOM05D006637 ORTHO05D001736 1.1e-07 62.8 63 57.1
BolC2t09205H Brassica oleracea HOM05D006637 ORTHO05D001736 1.4e-07 62.4 262 29.4
BcaC03g15494 Brassica carinata HOM05D006637 ORTHO05D001736 2.4e-07 61.6 253 30.4
Carub.0002s2101 Capsella rubella HOM05D006637 ORTHO05D001736 2.4e-07 61.6 298 30.2
MBI19_g14007_MAGBIO Magnolia biondii HOM05D006637 ORTHO05D001736 3.1e-07 61.2 260 31.2
Aa31LG4G4510 Aethionema arabicum HOM05D006637 ORTHO05D001736 4.1e-07 60.8 259 30.5
Cc00_g04710 Coffea canephora HOM05D006637 ORTHO05D001736 4.1e-07 60.8 207 32.9
PSO478G0913 Papaver somniferum HOM05D006637 ORTHO05D001736 4.1e-07 60.8 196 35.2
CARHR067480 Cardamine hirsuta HOM05D006637 ORTHO05D001736 7.0e-07 60.1 296 28.7
BraA07t31550Z Brassica rapa HOM05D006637 ORTHO05D001736 9.1e-07 59.7 270 31.5
AUR62021555 Chenopodium quinoa HOM05D006637 ORTHO05D001736 9.1e-07 59.7 122 38.5
TAR622G0628 Trochodendron aralioides HOM05D003787 ORTHO05D001736 9.1e-07 59.7 248 29.0
vmacro10428 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 1.6e-06 58.9 63 52.4
BraA02t06967Z Brassica rapa HOM05D006637 ORTHO05D001736 2.0e-06 58.5 260 30.0
AUR62008536 Chenopodium quinoa HOM05D006637 ORTHO05D001736 2.0e-06 58.5 186 31.7
GSVIVG01007850001 Vitis vinifera HOM05D006637 ORTHO05D001736 2.7e-06 58.2 244 30.7
Actinidia04823 Actinidia chinensis HOM05D006637 ORTHO05D001736 4.5e-06 57.4 150 37.3
A02p19190 Brassica napus HOM05D006637 ORTHO05D001736 4.5e-06 57.4 264 29.5
ECA238G2630 Erigeron canadensis HOM05D003787 ORTHO05D001736 4.5e-06 57.4 265 28.7
Prupe.1G287500 Prunus persica HOM05D003787 ORTHO05D001736 4.5e-06 57.4 271 28.0
Dinv17418 Davidia involucrata HOM05D006637 ORTHO05D001736 5.9e-06 57.0 241 32.4
Sc10g0009690 Simmondsia chinensis HOM05D006637 ORTHO05D001736 5.9e-06 57.0 270 27.8
PGSC0003DMG400024635 Solanum tuberosum HOM05D006637 ORTHO05D001736 5.9e-06 57.0 248 30.6
Thecc.02G330000 Theobroma cacao HOM05D003787 ORTHO05D001736 5.9e-06 57.0 60 58.3
CAN.G1228.21 Capsicum annuum HOM05D006637 ORTHO05D001736 7.7e-06 56.6 251 29.9
Oeu044877.1 Olea europaea HOM05D006637 ORTHO05D001736 7.7e-06 56.6 60 60.0
PSO017G7320 Papaver somniferum HOM05D006637 ORTHO05D001736 7.7e-06 56.6 196 34.7
Sc12g0007280 Simmondsia chinensis HOM05D006637 ORTHO05D001736 7.7e-06 56.6 274 28.8


User provided reference genes

Program Settings