Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 5.8e-203 710.7 363 100.0
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 1.6e-176 622.9 370 89.2
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 4.4e-174 614.8 366 88.8
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 5.0e-170 601.3 365 87.1
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 8.0e-160 567.4 366 81.7
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 2.0e-158 562.8 379 78.6
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 1.1e-156 557.0 362 80.9
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.3e-154 550.1 373 79.4
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 1.3e-154 550.1 370 79.7
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.1e-153 547.0 368 79.1
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.2e-144 516.9 346 77.2
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 6.1e-144 514.6 370 73.0
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.2e-142 510.4 368 73.4
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 3.4e-142 508.8 369 73.2
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 3.4e-142 508.8 369 73.2
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 5.7e-142 508.1 374 72.5
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.7e-141 506.5 347 75.5
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 2.2e-141 506.1 349 75.6
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 2.8e-141 505.8 366 72.1
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 3.7e-141 505.4 371 72.0
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.9e-141 505.0 366 72.1
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.4e-140 503.4 380 70.8
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.8e-140 503.1 372 71.8
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.8e-140 503.1 372 71.8
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 3.1e-140 502.3 338 76.9
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 3.1e-140 502.3 372 72.0
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 7.0e-140 501.1 360 74.2
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 9.2e-140 500.7 373 71.8
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.2e-139 500.4 342 76.0
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.6e-139 500.0 388 70.6
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 2.7e-139 499.2 372 73.4
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 7.8e-139 497.7 366 73.2
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 7.8e-139 497.7 337 75.4
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 7.8e-139 497.7 374 71.1
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.3e-138 496.9 341 74.8
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.7e-138 496.5 333 77.2
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.7e-138 496.5 370 71.4
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.7e-138 496.5 373 70.0
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.9e-138 495.7 370 70.8
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 3.8e-138 495.4 368 71.7
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 5.0e-138 495.0 359 72.4
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.6e-138 494.6 347 74.6
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 6.6e-138 494.6 388 68.8
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.1e-137 493.8 336 76.5
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.5e-137 493.4 335 76.7
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.9e-137 493.0 363 72.2
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.9e-137 493.0 363 72.2
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 3.3e-137 492.3 368 72.0
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 4.3e-137 491.9 338 75.1
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 9.5e-137 490.7 349 74.2
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 2.1e-136 489.6 324 79.0
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.1e-136 489.6 345 74.2
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.1e-136 489.6 340 76.2
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 2.8e-136 489.2 368 70.4
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 8.0e-136 487.6 342 74.0
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 1.0e-135 487.3 351 73.8
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.0e-135 487.3 355 72.4
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 1.0e-135 487.3 377 69.2
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.4e-135 486.9 340 75.3
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.3e-135 486.1 380 68.9
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 6.8e-135 484.6 340 74.4
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 8.9e-135 484.2 332 76.2
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 2.0e-134 483.0 352 72.7
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 3.4e-134 482.3 341 75.4
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.8e-134 481.5 335 75.8
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 9.8e-134 480.7 346 72.5
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 1.3e-133 480.3 326 76.4
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.7e-133 479.9 344 74.4
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 2.2e-133 479.6 318 77.7
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 4.9e-133 478.4 332 75.9
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 4.9e-133 478.4 355 72.4
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 6.4e-133 478.0 368 69.3
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 6.4e-133 478.0 384 68.0
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 1.4e-132 476.9 377 67.9
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 2.4e-132 476.1 364 69.8
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 4.1e-132 475.3 367 70.0
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 7.0e-132 474.6 362 70.7
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 2.0e-131 473.0 332 77.1
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.6e-131 471.9 364 68.7
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 4.6e-131 471.9 409 64.1
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 6.0e-131 471.5 339 72.3
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 1.3e-130 470.3 339 71.7
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 6.6e-130 468.0 344 71.5
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 7.3e-129 464.5 392 66.3
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 9.5e-129 464.2 365 70.1
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 2.8e-128 462.6 332 72.0
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 2.3e-127 459.5 330 72.1
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.9e-125 452.6 382 64.1
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 8.3e-125 451.1 341 71.6
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 8.3e-125 451.1 366 69.7
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 7.0e-124 448.0 342 69.6
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.0e-124 448.0 335 72.2
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 2.7e-123 446.0 309 76.1
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.0e-122 444.1 300 77.3
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.7e-122 443.4 300 77.3
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.5e-121 440.3 330 70.0
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 6.2e-120 434.9 328 72.6
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 4.0e-119 432.2 322 72.7
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.2e-118 430.6 234 93.2
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 1.2e-118 430.6 278 80.2
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.0e-118 429.9 321 71.7
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 8.1e-112 407.9 291 72.2
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 2.4e-111 406.4 325 68.6
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 7.6e-110 401.4 293 67.2
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 1.7e-109 400.2 276 71.4
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.4e-108 397.1 347 64.8
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 7.1e-108 394.8 328 63.4
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 6.4e-101 371.7 280 72.9
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.9e-98 362.5 299 64.2
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 1.9e-97 360.1 285 63.2
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 1.6e-91 340.5 284 65.1
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 2.0e-86 323.6 200 80.5
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.9e-81 307.0 243 59.7
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 2.5e-81 306.6 268 58.2
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 4.0e-79 299.3 254 57.5
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 6.5e-77 292.0 229 68.1
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 8.2e-72 275.0 214 71.0
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 2.7e-67 260.0 174 73.6
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 3.8e-61 239.6 178 71.9
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 5.7e-57 225.7 157 74.5
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 5.5e-52 209.1 234 51.3
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 3.3e-49 199.9 109 91.7
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.4e-47 194.5 115 84.3
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 4.5e-46 189.5 134 74.6
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 5.0e-45 186.0 167 65.3
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 4.7e-43 179.5 176 59.7
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 1.8e-39 167.5 142 65.5
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 1.6e-38 164.5 142 64.8
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 6.1e-35 152.5 106 67.0
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 2.7e-30 137.1 305 31.1
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 1.2e-27 128.3 236 33.9
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 5.4e-23 112.8 164 37.2
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.5e-22 110.2 156 42.9
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 5.9e-22 109.4 176 43.8
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 1.9e-20 104.4 241 29.9
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 4.0e-18 96.7 50 92.0
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.0e-17 94.4 77 66.2
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.7e-14 84.0 65 61.5
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 8.6e-13 79.0 81 58.0
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 7.3e-12 75.9 84 48.8


User provided reference genes

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