Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 3.8e-71 271.9 199 100.0
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 3.3e-51 205.7 200 85.0
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 1.7e-50 203.4 199 84.9
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 1.8e-49 199.9 199 82.9
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 7.7e-40 167.9 198 74.2
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.1e-38 164.1 199 73.9
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 4.2e-38 162.2 202 73.8
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 5.7e-35 151.8 204 66.2
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 9.8e-35 151.0 204 66.7
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.9e-31 139.4 193 67.9
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.1e-30 137.5 193 66.8
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 7.2e-30 134.8 193 66.3
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 2.8e-29 132.9 170 72.4
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 2.8e-29 132.9 193 66.8
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 6.1e-29 131.7 171 75.4
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 8.0e-29 131.3 167 73.7
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.0e-28 131.0 169 72.8
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 1.4e-28 130.6 169 72.8
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.8e-28 130.2 184 67.4
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 3.0e-28 129.4 166 72.9
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 1.2e-27 127.5 158 77.2
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 1.5e-27 127.1 199 65.8
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.5e-27 127.1 176 69.3
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 3.4e-27 125.9 191 64.9
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 3.4e-27 125.9 197 65.5
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 2.8e-26 122.9 171 67.8
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 3.7e-26 122.5 191 64.4
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 6.3e-26 121.7 170 70.0
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 1.1e-25 120.9 194 64.9
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 1.8e-25 120.2 158 72.2
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 2.4e-25 119.8 165 70.9
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 3.1e-25 119.4 162 71.0
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 4.1e-25 119.0 161 75.8
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 5.4e-25 118.6 177 68.4
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 7.0e-25 118.2 170 67.1
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 9.2e-25 117.9 171 66.1
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 2.0e-24 116.7 179 65.9
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 3.5e-24 115.9 160 75.6
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 4.5e-24 115.5 168 67.3
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 5.9e-24 115.2 186 64.5
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 1.7e-23 113.6 203 60.6
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 2.3e-23 113.2 166 67.5
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 3.8e-23 112.5 162 71.0
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 6.6e-23 111.7 164 68.9
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 6.6e-23 111.7 172 67.4
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.1e-22 110.9 194 58.2
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.5e-22 110.5 158 70.3
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 1.5e-22 110.5 170 67.1
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 1.9e-22 110.2 162 67.3
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 3.3e-22 109.4 187 66.8
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.2e-21 107.5 179 66.5
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.6e-21 107.1 163 67.5
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.6e-21 107.1 163 67.5
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 1.6e-21 107.1 158 71.5
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 2.1e-21 106.7 163 68.1
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 3.6e-21 105.9 192 62.0
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 3.6e-21 105.9 163 66.9
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 3.6e-21 105.9 165 67.9
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 4.7e-21 105.5 163 66.9
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 8.0e-21 104.8 163 66.9
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 1.8e-20 103.6 163 68.7
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 2.3e-20 103.2 143 70.6
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 3.0e-20 102.8 164 67.7
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 4.0e-20 102.4 163 65.6
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 5.2e-20 102.1 170 64.7
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 5.2e-20 102.1 192 60.9
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 1.2e-19 100.9 162 66.0
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.5e-19 100.5 144 72.9
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 2.0e-19 100.1 181 61.3
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 4.4e-19 99.0 139 74.1
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 5.7e-19 98.6 191 62.3
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 5.7e-19 98.6 163 66.9
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.3e-18 97.4 163 68.1
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 1.7e-18 97.1 172 64.0
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 2.2e-18 96.7 160 66.2
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 2.2e-18 96.7 200 59.0
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 3.7e-18 95.9 163 64.4
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 3.7e-18 95.9 188 61.7
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 8.3e-18 94.7 164 62.8
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.4e-17 94.0 168 63.7
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.4e-17 94.0 188 58.5
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 2.4e-17 93.2 163 64.4
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 2.4e-17 93.2 163 64.4
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 4.1e-17 92.4 143 72.7
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 4.1e-17 92.4 164 61.0
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 5.4e-17 92.0 160 66.2
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 9.2e-17 91.3 164 65.2
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.0e-16 90.1 162 63.6
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 2.0e-16 90.1 164 61.6
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 3.5e-16 89.4 125 76.8
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 4.6e-16 89.0 163 65.6
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 4.6e-16 89.0 162 65.4
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 5.9e-16 88.6 160 64.4
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 2.3e-15 86.7 161 65.8
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 3.9e-15 85.9 120 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.9e-14 83.6 119 74.8
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.9e-14 83.6 185 58.4
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 9.5e-14 81.3 68 64.7
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 1.6e-13 80.5 64 70.3
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 1.6e-13 80.5 163 65.6
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 2.1e-13 80.1 159 62.3
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 3.6e-13 79.3 126 69.0
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 4.7e-13 79.0 162 59.9
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 1.1e-12 77.8 64 64.1
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 1.1e-12 77.8 162 58.6
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 6.8e-12 75.1 191 52.9
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.9e-09 67.0 142 39.4
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 8.6e-07 58.2 77 50.6


User provided reference genes

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