Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1215 Trifolium pratense HOM05D007610 ORTHO05D009592 8.1e-51 203.4 97 100.0
Eucgr.H00670 Eucalyptus grandis HOM05D007610 ORTHO05D009592 1.8e-29 132.5 97 71.1
CiPaw.10G111700 Carya illinoinensis HOM05D007610 ORTHO05D009592 3.9e-29 131.3 97 70.1
Nn4g24567 Nelumbo nucifera HOM05D007610 ORTHO05D009592 8.7e-29 130.2 97 69.1
Psat5g237320 Pisum sativum HOM05D007610 ORTHO05D009592 8.7e-29 130.2 96 68.8
CSS0020010 Camellia sinensis var. sinensis HOM05D007610 ORTHO05D009592 1.1e-28 129.8 97 70.1
Potri.008G010300 Populus trichocarpa HOM05D007610 ORTHO05D009592 1.1e-28 129.8 97 67.0
Atru.chr1.2755 Acer truncatum HOM05D007610 ORTHO05D009592 1.5e-28 129.4 97 69.1
ATR0743G067 Amborella trichopoda HOM05D007610 ORTHO05D009592 1.5e-28 129.4 97 69.1
Prupe.1G386000 Prunus persica HOM05D007610 ORTHO05D009592 1.9e-28 129.0 97 68.0
Thecc.05G204400 Theobroma cacao HOM05D007610 ORTHO05D009592 1.9e-28 129.0 97 69.1
CSS0005029 Camellia sinensis var. sinensis HOM05D007610 ORTHO05D009592 2.5e-28 128.6 97 69.1
CANSAT56G1772 Cannabis sativa HOM05D007610 ORTHO05D009592 2.5e-28 128.6 97 68.0
MELO3C012466.2 Cucumis melo HOM05D007610 ORTHO05D009592 2.5e-28 128.6 97 68.0
CsaV3_5G036700 Cucumis sativus L. HOM05D007610 ORTHO05D009592 2.5e-28 128.6 97 68.0
Duzib128G1002 Durio zibethinus HOM05D007610 ORTHO05D009592 2.5e-28 128.6 97 68.0
Manes.06G155800 Manihot esculenta HOM05D007610 ORTHO05D009592 4.3e-28 127.9 97 68.0
Hma1.2p1_0338F.1_g129570 Hydrangea macrophylla HOM05D007610 ORTHO05D009592 5.6e-28 127.5 97 68.0
Sed0022524 Sechium edule HOM05D007610 ORTHO05D009592 5.6e-28 127.5 97 67.0
Sed0001467 Sechium edule HOM05D007610 ORTHO05D009592 7.4e-28 127.1 97 67.0
TWI75G0175 Tripterygium wilfordii HOM05D007610 ORTHO05D009592 7.4e-28 127.1 97 67.0
GSVIVG01015989001 Vitis vinifera HOM05D007610 ORTHO05D009592 7.4e-28 127.1 97 67.0
HanXRQChr06g0174541 Helianthus annuus HOM05D007610 ORTHO05D009592 9.6e-28 126.7 97 68.0
Cc04_g05530 Coffea canephora HOM05D007610 ORTHO05D009592 1.3e-27 126.3 97 68.0
Lalb_Chr01g0016601 Lupinus albus HOM05D007610 ORTHO05D009592 1.3e-27 126.3 97 68.0
PSO675G0688 Papaver somniferum HOM05D007610 ORTHO05D009592 1.3e-27 126.3 97 64.9
PSO732G0180 Papaver somniferum HOM05D007610 ORTHO05D009592 1.3e-27 126.3 97 64.9
PGR083G1775 Punica granatum HOM05D007610 ORTHO05D009592 1.3e-27 126.3 97 67.0
Glyma.12G229900 Glycine max HOM05D007610 ORTHO05D009592 1.6e-27 125.9 97 67.0
Gohir.A08G224300 Gossypium hirsutum HOM05D007610 ORTHO05D009592 2.1e-27 125.6 97 68.0
Gohir.D08G244600 Gossypium hirsutum HOM05D007610 ORTHO05D009592 2.1e-27 125.6 97 68.0
Gorai.004G260900 Gossypium raimondii HOM05D007610 ORTHO05D009592 2.1e-27 125.6 97 68.0
HanXRQChr05g0157571 Helianthus annuus HOM05D007610 ORTHO05D009592 2.1e-27 125.6 97 67.0
Potri.010G248800 Populus trichocarpa HOM05D007610 ORTHO05D009592 2.8e-27 125.2 97 64.9
Lsat_1_v5_gn_1_30601 Lactuca sativa HOM05D007610 ORTHO05D009592 3.7e-27 124.8 97 67.0
MD08G1038400 Malus domestica HOM05D007610 ORTHO05D009592 3.7e-27 124.8 97 64.9
GSVIVG01015971001 Vitis vinifera HOM05D007610 ORTHO05D009592 3.7e-27 124.8 97 66.0
CDE07G1447 Ceratophyllum demersum HOM05D007610 ORTHO05D009592 4.8e-27 124.4 97 67.0
Migut.I00647 Erythranthe guttata HOM05D007610 ORTHO05D009592 4.8e-27 124.4 97 67.0
Glyma.13G269700 Glycine max HOM05D007610 ORTHO05D009592 4.8e-27 124.4 97 66.0
Phvul.005G082100 Phaseolus vulgaris HOM05D007610 ORTHO05D009592 4.8e-27 124.4 97 67.0
Lj6g0018100 Lotus japonicus HOM05D007610 ORTHO05D009592 6.2e-27 124.0 97 66.0
arahy.Tifrunner.gnm1.ann1.TJ8EEM Arachis hypogaea HOM05D007610 ORTHO05D009592 8.1e-27 123.6 97 66.0
arahy.Tifrunner.gnm1.ann1.Z969QS Arachis hypogaea HOM05D007610 ORTHO05D009592 8.1e-27 123.6 97 66.0
ECA246G4312 Erigeron canadensis HOM05D007610 ORTHO05D009592 8.1e-27 123.6 95 67.4
MSTRG.11209 Avicennia marina HOM05D007610 ORTHO05D009592 1.1e-26 123.2 97 64.9
CAN.G1008.28 Capsicum annuum HOM05D007610 ORTHO05D009592 1.1e-26 123.2 97 66.0
Lalb_Chr20g0109261 Lupinus albus HOM05D007610 ORTHO05D009592 3.1e-26 121.7 97 64.9
THA.LOC104823659 Tarenaya hassleriana HOM05D007610 ORTHO05D009592 4.0e-26 121.3 97 66.0
Zm00001eb102930 Zea mays HOM05D007610 ORTHO05D009592 4.0e-26 121.3 97 62.9
EL10Ac8g19396 Beta vulgaris HOM05D007610 ORTHO05D009592 9.0e-26 120.2 97 63.9
FAN27G3309 Fragaria x ananassa HOM05D003072 ORTHO05D009592 9.0e-26 120.2 97 63.9
Actinidia18276 Actinidia chinensis HOM05D007610 ORTHO05D009592 1.2e-25 119.8 97 63.9
Ah.09g231800 Amaranthus hybridus HOM05D007610 ORTHO05D009592 1.2e-25 119.8 97 63.9
Ciclev10017354m.g Citrus clementina HOM05D007610 ORTHO05D009592 1.2e-25 119.8 76 80.3
Dinv13690 Davidia involucrata HOM05D007610 ORTHO05D009592 1.2e-25 119.8 97 64.9
Sopen03g036810 Solanum pennellii HOM05D007610 ORTHO05D009592 1.2e-25 119.8 97 63.9
PGSC0003DMG400014163 Solanum tuberosum HOM05D007610 ORTHO05D009592 1.2e-25 119.8 97 63.9
Peaxi162Scf00314g00832 Petunia axillaris HOM05D007610 ORTHO05D009592 2.0e-25 119.0 97 62.9
Cpa.g.c36937 Carica papaya HOM05D007610 ORTHO05D009592 2.6e-25 118.6 58 94.8
Medtr2g076300 Medicago truncatula HOM05D007610 ORTHO05D009592 3.4e-25 118.2 60 88.3
RcHm_v2.0_Chr6g0300241 Rosa chinensis HOM05D007610 ORTHO05D009592 3.4e-25 118.2 97 62.9
Solyc03g117900.3 Solanum lycopersicum HOM05D007610 ORTHO05D009592 5.8e-25 117.5 97 62.9
VMungo1080G1821 Vigna mungo HOM05D007610 ORTHO05D009592 7.6e-25 117.1 72 79.2
Actinidia08923 Actinidia chinensis HOM05D007610 ORTHO05D009592 1.7e-24 115.9 64 85.9
BolC8t52386H Brassica oleracea HOM05D007610 ORTHO05D009592 2.9e-24 115.2 97 62.9
Sc10g0005460 Simmondsia chinensis HOM05D007610 ORTHO05D009592 2.9e-24 115.2 97 61.9
AL1G21800 Arabidopsis lyrata HOM05D007610 ORTHO05D009592 3.8e-24 114.8 97 61.9
Aa31LG1G3990 Aethionema arabicum HOM05D007610 ORTHO05D009592 4.9e-24 114.4 97 62.9
A09p64730 Brassica napus HOM05D007610 ORTHO05D009592 4.9e-24 114.4 97 62.9
C08p48470 Brassica napus HOM05D007610 ORTHO05D009592 4.9e-24 114.4 97 62.9
BraA09t41821Z Brassica rapa HOM05D007610 ORTHO05D009592 4.9e-24 114.4 97 62.9
Thhalv10009851m.g Eutrema salsugineum HOM05D007610 ORTHO05D009592 4.9e-24 114.4 97 62.9
Sp1g09560 Schrenkiella parvula HOM05D007610 ORTHO05D009592 4.9e-24 114.4 97 62.9
Mapoly0035s0053 Marchantia polymorpha HOM05D007610 ORTHO05D009592 8.4e-24 113.6 97 59.8
AT1G10865 Arabidopsis thaliana HOM05D007610 ORTHO05D009592 1.4e-23 112.8 97 61.9
CARHR011080 Cardamine hirsuta HOM05D007610 ORTHO05D009592 1.9e-23 112.5 97 60.8
HPP92_003445 Vanilla planifolia HOM05D007610 ORTHO05D009592 4.2e-23 111.3 88 63.6
Nitab4.5_0007669g0050 Nicotiana tabacum HOM05D007610 ORTHO05D009592 5.5e-23 110.9 58 87.9
FvH4_2g40490 Fragaria vesca HOM05D007610 ORTHO05D009592 1.2e-22 109.8 58 86.2
unitig_8.g3047 Utricularia gibba HOM05D005498 ORTHO05D006719 1.2e-22 109.8 59 86.4
DCAR_021387 Daucus carota HOM05D007610 ORTHO05D009592 2.1e-22 109.0 62 80.6
BcaNung06200 Brassica carinata HOM05D000246 ORTHO05D005907 2.7e-22 108.6 94 61.7
Sabra08G0006100 Salix brachista HOM05D002706 ORTHO05D003253 3.5e-22 108.2 63 79.4
Migut.K01190 Erythranthe guttata HOM05D007610 ORTHO05D009592 4.6e-22 107.8 59 86.4
Duzib106G1141 Durio zibethinus HOM05D007610 ORTHO05D009592 6.0e-22 107.5 59 88.1
Nitab4.5_0000976g0340 Nicotiana tabacum HOM05D007610 ORTHO05D009592 1.0e-21 106.7 58 84.5
MD00G1038600 Malus domestica HOM05D007610 ORTHO05D009592 8.7e-21 103.6 89 59.6
Carub.0001s1040 Capsella rubella HOM05D007610 ORTHO05D009592 1.1e-20 103.2 58 84.5
CBR_g23045 Chara braunii HOM05D007610 ORTHO05D009592 1.5e-20 102.8 97 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2676 Anthoceros agrestis HOM05D007610 ORTHO05D009592 2.5e-20 102.1 97 53.6
AagrBONN_evm.TU.Sc2ySwM_344.3800 Anthoceros agrestis HOM05D007610 ORTHO05D009592 2.8e-19 98.6 97 51.5
Oeu036461.1 Olea europaea HOM05D007610 ORTHO05D009592 8.2e-19 97.1 65 73.8
Oeu036457.1 Olea europaea HOM05D007610 ORTHO05D009592 9.0e-18 93.6 65 70.8
Dinv23251 Davidia involucrata HOM05D007610 ORTHO05D009592 7.1e-15 84.0 74 60.8
ClCG05G026760 Citrullus lanatus HOM05D007610 ORTHO05D009592 4.6e-14 81.3 43 88.4
SHI04239 Sapria himalayana HOM05D007610 ORTHO05D009592 2.3e-13 79.0 76 52.6
Pp3c10_17250 Physcomitrium patens HOM05D007610 ORTHO05D009592 5.9e-09 64.3 56 48.2
MCO01G475 Micromonas commoda HOM05D007610 ORTHO05D009592 5.5e-07 57.8 97 36.1
PRCOL_00003475 Prasinoderma coloniale HOM05D007610 ORTHO05D009592 1.2e-06 56.6 97 36.1


User provided reference genes

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