Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 5.3e-185 651.7 595 100.0
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 3.9e-95 353.2 306 81.0
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.6e-72 278.1 290 74.5
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 2.7e-64 250.8 321 57.3
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 6.0e-64 249.6 245 76.7
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 7.6e-59 232.6 317 63.1
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 7.4e-54 216.1 317 61.2
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 3.7e-53 213.8 317 61.2
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 5.3e-52 209.9 288 62.8
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 5.0e-50 203.4 314 60.5
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 2.1e-48 198.0 309 58.9
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 8.2e-37 159.5 317 51.1
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 1.2e-35 155.6 311 54.3
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 2.6e-35 154.5 317 52.4
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 2.2e-34 151.4 319 50.5
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 1.1e-30 139.0 203 66.0
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 1.5e-30 138.7 318 50.0
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 1.7e-29 135.2 245 59.2
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 2.8e-29 134.4 224 62.1
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 2.8e-29 134.4 315 49.5
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 8.2e-29 132.9 247 56.7
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 8.2e-29 132.9 312 50.6
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 2.6e-27 127.9 309 49.5
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 3.5e-27 127.5 292 50.7
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 3.5e-27 127.5 309 49.5
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 4.5e-27 127.1 453 55.0
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 8.5e-26 122.9 308 50.0
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 1.9e-25 121.7 179 41.3
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 8.0e-24 116.3 282 50.0
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.0e-23 115.9 293 47.4
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.4e-23 115.5 309 48.2
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 1.8e-23 115.2 317 50.5
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 4.0e-23 114.0 290 51.0
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 8.8e-23 112.8 310 47.7
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 3.3e-22 110.9 291 49.1
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 4.4e-22 110.5 303 49.2
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 4.4e-22 110.5 297 45.8
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 1.3e-21 109.0 281 52.3
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.7e-21 108.6 316 47.2
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 2.2e-21 108.2 300 49.0
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 2.8e-21 107.8 299 50.2
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 8.2e-21 106.3 241 55.2
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 1.1e-20 105.9 119 47.1
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.8e-20 105.1 202 61.4
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 4.1e-20 104.0 246 53.7
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 9.1e-20 102.8 311 46.0
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.2e-19 102.4 239 55.2
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 3.5e-19 100.9 200 60.5
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 4.5e-19 100.5 239 55.2
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 5.9e-19 100.1 286 48.6
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 7.7e-19 99.8 246 52.8
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.0e-18 99.4 240 48.3
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.3e-18 99.0 241 47.7
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 2.2e-18 98.2 305 49.5
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 2.2e-18 98.2 302 45.4
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 5.0e-18 97.1 292 48.6
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 6.5e-18 96.7 300 48.3
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.5e-17 95.5 232 55.2
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 7.2e-17 93.2 306 43.1
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 9.4e-17 92.8 223 56.1
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 1.0e-15 89.4 151 39.1
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 8.8e-15 86.3 92 46.7
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 1.2e-14 85.9 213 55.4
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 1.2e-14 85.9 297 44.4
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 1.2e-14 85.9 193 57.0
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 1.5e-14 85.5 96 47.9
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.5e-14 85.5 293 46.4
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 2.6e-14 84.7 302 39.4
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 7.5e-14 83.2 101 43.6
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 9.8e-14 82.8 121 39.7
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 9.8e-14 82.8 176 34.7
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 9.8e-14 82.8 303 43.6
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 1.3e-13 82.4 153 37.9
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 2.2e-13 81.6 155 37.4
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 2.2e-13 81.6 155 38.1
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 3.7e-13 80.9 231 51.9
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 4.8e-13 80.5 303 43.9
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 3.1e-12 77.8 224 53.6
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 4.1e-12 77.4 175 32.0
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 5.4e-12 77.0 166 30.1
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 1.2e-11 75.9 169 29.0
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 2.7e-11 74.7 304 43.1
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 4.5e-11 73.9 304 42.8
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 5.9e-11 73.6 82 52.4
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 1.0e-10 72.8 207 57.5
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 1.3e-10 72.4 161 28.6
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 1.7e-10 72.0 301 42.9
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 7.2e-09 66.6 168 28.0
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 2.8e-08 64.7 78 48.7
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.8e-08 64.7 291 43.6
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 3.0e-07 61.2 74 47.3
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 5.2e-07 60.5 109 32.1


User provided reference genes

Program Settings