Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 2.7e-247 858.2 433 100.0
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 1.8e-230 802.4 435 91.7
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 4.3e-229 797.7 430 92.8
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 2.8e-228 795.0 435 92.2
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 2.0e-218 762.3 426 88.5
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 3.4e-218 761.5 435 87.8
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 8.5e-217 756.9 441 86.8
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 1.1e-211 740.0 431 86.5
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 3.1e-211 738.4 435 85.5
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 4.7e-207 724.5 438 83.6
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 7.4e-205 717.2 437 83.1
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 1.7e-204 716.1 432 83.8
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 2.2e-188 662.5 437 77.1
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 5.9e-186 654.4 439 74.5
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 1.7e-185 652.9 442 75.3
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 5.0e-185 651.4 438 74.4
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 1.1e-184 650.2 441 73.9
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 9.4e-184 647.1 456 73.0
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.1e-183 646.0 441 73.2
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 4.7e-183 644.8 443 74.5
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 8.0e-183 644.0 438 75.8
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 1.4e-182 643.3 440 74.5
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 3.0e-182 642.1 435 74.5
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 7.5e-181 637.5 448 73.7
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.3e-180 636.7 438 73.3
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 1.7e-180 636.3 439 73.8
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 2.2e-180 636.0 437 74.1
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 4.8e-180 634.8 442 74.2
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 6.3e-180 634.4 438 72.8
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.1e-179 633.6 438 72.1
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.4e-179 633.3 443 72.0
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 1.8e-179 632.9 425 74.1
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.8e-179 632.9 437 73.2
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 4.1e-179 631.7 443 73.4
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 4.1e-179 631.7 438 73.1
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 7.0e-179 630.9 437 73.9
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 7.0e-179 630.9 426 75.1
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 7.7e-178 627.5 448 71.9
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 1.3e-177 626.7 433 73.0
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 2.3e-177 625.9 434 73.7
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 6.6e-177 624.4 427 74.0
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 8.6e-177 624.0 437 73.5
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 1.9e-176 622.9 433 73.7
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 4.2e-176 621.7 444 72.7
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 9.5e-176 620.5 435 72.9
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.6e-175 618.6 428 73.1
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.8e-174 616.3 439 72.4
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 2.3e-174 615.9 443 69.1
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 5.2e-174 614.8 437 72.1
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 1.2e-173 613.6 434 71.7
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.5e-173 613.2 434 72.1
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.0e-173 612.8 431 72.6
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.7e-172 609.8 436 73.2
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 8.3e-172 607.4 444 71.6
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 1.8e-171 606.3 443 68.2
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 2.0e-170 602.8 435 71.0
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.5e-170 602.1 441 68.5
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 2.3e-169 599.4 435 70.3
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 2.9e-169 599.0 432 70.1
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 5.0e-169 598.2 432 70.6
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 1.5e-168 596.7 430 70.5
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 4.3e-168 595.1 437 69.6
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 4.3e-168 595.1 439 68.1
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 5.6e-168 594.7 434 71.0
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 7.3e-168 594.3 440 67.5
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.1e-167 592.8 434 68.4
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 1.4e-166 590.1 435 68.5
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 1.8e-166 589.7 442 68.3
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 8.9e-166 587.4 458 67.7
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 3.7e-164 582.0 435 68.3
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 3.7e-164 582.0 435 68.3
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 6.4e-164 581.3 428 70.3
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 1.1e-163 580.5 435 68.0
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 1.1e-163 580.5 435 68.0
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.4e-163 579.3 447 67.3
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 7.0e-163 577.8 429 68.5
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.2e-162 577.0 438 68.9
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 4.6e-162 575.1 441 68.0
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 3.9e-161 572.0 423 68.1
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 5.0e-161 571.6 440 65.5
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 1.9e-160 569.7 433 68.8
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 7.3e-160 567.8 429 66.7
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 1.2e-159 567.0 445 65.6
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 2.8e-159 565.8 430 67.9
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 8.0e-159 564.3 444 64.6
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 8.3e-156 554.3 493 63.1
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 3.2e-155 552.4 446 66.4
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.0e-153 545.8 432 64.6
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 8.6e-153 544.3 432 66.2
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 1.6e-151 540.0 378 72.5
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 2.3e-150 536.2 444 62.6
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 6.4e-148 528.1 338 78.1
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 6.4e-148 528.1 423 65.0
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.1e-144 517.3 365 71.2
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 2.8e-143 512.7 425 63.3
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.8e-142 510.0 445 60.7
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 4.0e-142 508.8 341 76.0
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 2.6e-141 506.1 462 59.3
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 7.8e-138 494.6 347 73.2
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 9.3e-131 471.1 431 57.8
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.1e-130 469.9 359 68.0
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 2.1e-130 469.9 447 59.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 2.5e-128 463.0 348 68.7
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 3.3e-128 462.6 435 58.4
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 6.4e-124 448.4 436 52.8
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 3.2e-123 446.0 431 52.9
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 5.4e-123 445.3 328 68.6
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 2.1e-122 443.4 428 51.6
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 2.8e-119 433.0 607 44.3
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.1e-118 431.0 427 52.2
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 2.9e-116 422.9 292 75.0
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 1.2e-90 337.8 444 43.0
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 8.2e-87 325.1 308 53.6
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.2e-83 312.8 208 75.5
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 7.4e-80 302.0 278 59.7
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 7.7e-77 292.0 333 49.8
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 2.6e-72 276.9 212 64.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.0e-46 189.1 161 59.0
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 8.1e-42 175.6 400 33.0
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-36 155.6 204 47.5
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 2.3e-33 147.5 119 62.2
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 4.9e-31 139.8 102 66.7
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 3.4e-24 117.1 62 88.7
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 5.1e-20 103.2 113 44.2
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 8.1e-18 95.9 97 46.4
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.2e-14 84.0 91 53.8
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 7.1e-14 82.8 40 100.0
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 1.9e-11 74.7 64 53.1
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 3.1e-09 67.4 111 37.8
Medtr2g027310 Medicago truncatula HOM05D006332 ORTHO05D034078 1.5e-08 65.1 34 88.2
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 1.7e-07 61.6 37 75.7


User provided reference genes

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