Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1202 Trifolium pratense HOM05D009499 ORTHO05D010391 2.8e-64 248.4 123 100.0
Psat0s3384g0080 Pisum sativum HOM05D009499 ORTHO05D010391 3.4e-46 188.3 125 76.8
Medtr5g093240 Medicago truncatula HOM05D009499 ORTHO05D010391 2.9e-45 185.3 123 75.6
LjContig00272g0017445 Lotus japonicus HOM05D009499 ORTHO05D010391 2.6e-30 135.6 127 59.1
Lalb_Chr04g0248321 Lupinus albus HOM05D009499 ORTHO05D010391 1.1e-28 130.2 126 61.1
Glyma.14G022200 Glycine max HOM05D009499 ORTHO05D010391 2.4e-23 112.5 122 55.7
Glyma.02G292400 Glycine max HOM05D009499 ORTHO05D010391 2.9e-21 105.5 127 52.0
arahy.Tifrunner.gnm1.ann1.IA75E6 Arachis hypogaea HOM05D009499 ORTHO05D010391 3.2e-20 102.1 128 49.2
COL.COLO4_09684 Corchorus olitorius HOM05D009499 ORTHO05D010391 2.4e-15 85.9 117 45.3
QL08p009388 Quercus lobata HOM05D009499 ORTHO05D010391 4.1e-15 85.1 122 44.3
Phvul.008G269200 Phaseolus vulgaris HOM05D009499 ORTHO05D010391 1.2e-14 83.6 118 44.9
Gohir.A01G081300 Gossypium hirsutum HOM05D009499 ORTHO05D010391 4.2e-12 75.1 122 37.7
Cfa020318 Carpinus fangiana HOM05D009499 ORTHO05D010391 7.2e-12 74.3 123 39.0
Gohir.D01G068400 Gossypium hirsutum HOM05D009499 ORTHO05D010391 1.2e-11 73.6 122 36.9
Gorai.002G090400 Gossypium raimondii HOM05D009499 ORTHO05D010391 1.2e-11 73.6 122 36.9
Thecc.07G033200 Theobroma cacao HOM05D009499 ORTHO05D010391 1.0e-10 70.5 115 40.9
FvH4_3g23030 Fragaria vesca HOM05D029608 ORTHO05D010391 3.9e-10 68.6 125 36.0
CiPaw.12G131500 Carya illinoinensis HOM05D009499 ORTHO05D010391 5.1e-10 68.2 119 35.3
FAN25G2521 Fragaria x ananassa HOM05D029608 ORTHO05D010391 6.7e-10 67.8 125 38.4
PGR031G3037 Punica granatum HOM05D009499 ORTHO05D010391 6.7e-10 67.8 56 57.1
Prupe.4G216700 Prunus persica HOM05D009499 ORTHO05D010391 2.6e-09 65.9 66 50.0
CANSAT11G0805 Cannabis sativa HOM05D009499 ORTHO05D001567 5.7e-09 64.7 61 55.7
FAN21G1965 Fragaria x ananassa HOM05D029608 ORTHO05D010391 5.7e-09 64.7 122 34.4
FAN11G2515 Fragaria x ananassa HOM05D029608 ORTHO05D010391 7.4e-09 64.3 125 34.4
Eucgr.F03479 Eucalyptus grandis HOM05D009499 ORTHO05D010391 9.7e-09 63.9 60 53.3
Rhsim06G0215000 Rhododendron simsii HOM05D011640 ORTHO05D010391 9.7e-09 63.9 120 38.3
Sabra04G0046300 Salix brachista HOM05D009499 ORTHO05D010391 3.7e-08 62.0 82 40.2
Potri.004G068600 Populus trichocarpa HOM05D009499 ORTHO05D010391 6.3e-08 61.2 91 38.5
Duzib213G0894 Durio zibethinus HOM05D009499 ORTHO05D010391 1.4e-07 60.1 55 49.1
Actinidia32256 Actinidia chinensis HOM05D011640 ORTHO05D010391 2.4e-07 59.3 123 38.2
QL08p009419 Quercus lobata HOM05D009499 ORTHO05D010391 2.4e-07 59.3 119 33.6
TWI38G1660 Tripterygium wilfordii HOM05D009499 ORTHO05D010391 5.3e-07 58.2 128 36.7
Nitab4.5_0002287g0020 Nicotiana tabacum HOM05D011640 ORTHO05D010391 9.1e-07 57.4 137 33.6
Dinv40772 Davidia involucrata HOM05D009499 ORTHO05D010391 1.2e-06 57.0 70 48.6
vmacro11741 Vaccinium macrocarpon HOM05D011640 ORTHO05D010391 1.2e-06 57.0 118 33.9


User provided reference genes

Program Settings