Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.9e-133 479.6 314 100.0
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.3e-107 392.9 369 74.8
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 6.1e-100 368.2 366 67.5
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.0e-78 297.7 366 54.1
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 8.6e-78 294.7 360 56.4
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 4.3e-77 292.4 371 57.1
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 3.6e-76 289.3 364 55.8
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 3.0e-70 269.6 333 58.9
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 4.4e-66 255.8 352 52.6
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 3.8e-65 252.7 365 50.7
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.1e-64 251.1 361 51.0
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.9e-64 250.4 352 49.1
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 3.9e-62 242.7 370 49.2
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.9e-62 242.7 362 48.6
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 5.1e-62 242.3 371 55.0
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.1e-61 241.1 361 48.5
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.9e-61 240.4 368 47.3
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 2.5e-61 240.0 244 65.2
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 5.6e-61 238.8 244 65.2
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 9.6e-61 238.0 354 51.7
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 3.6e-60 236.1 363 45.7
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.1e-59 234.6 231 59.3
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 5.3e-59 232.3 242 66.1
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 9.0e-59 231.5 343 50.1
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 9.0e-59 231.5 236 63.1
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.5e-58 230.7 355 45.9
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.5e-58 230.7 343 47.2
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 2.0e-58 230.3 357 46.5
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 2.0e-58 230.3 356 48.0
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.6e-58 229.9 343 45.5
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.4e-58 229.6 346 48.6
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.8e-58 228.8 343 46.9
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 9.9e-58 228.0 358 47.2
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 1.3e-57 227.6 370 47.0
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 3.8e-57 226.1 400 50.0
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 4.9e-57 225.7 370 43.5
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.9e-56 223.8 240 62.1
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.9e-56 223.8 240 62.1
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.9e-56 223.8 356 47.2
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 2.4e-56 223.4 363 47.4
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.4e-56 223.4 367 46.6
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 2.4e-56 223.4 238 62.6
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 3.2e-56 223.0 378 46.0
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 3.2e-56 223.0 367 46.0
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 3.2e-56 223.0 344 45.1
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 5.4e-56 222.2 238 62.6
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 5.4e-56 222.2 238 62.6
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.4e-56 222.2 346 48.0
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 7.1e-56 221.9 233 61.8
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 7.1e-56 221.9 366 44.8
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 7.1e-56 221.9 229 61.1
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.2e-55 221.1 366 47.5
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.6e-55 220.7 238 61.3
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 3.5e-55 219.5 226 65.0
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 3.5e-55 219.5 382 44.8
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.0e-54 218.0 369 50.1
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.3e-54 217.6 367 45.0
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 3.9e-54 216.1 334 50.3
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 5.1e-54 215.7 340 42.6
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.5e-53 214.2 400 40.5
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.9e-53 213.8 348 54.0
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 1.9e-53 213.8 230 67.4
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 4.3e-53 212.6 369 48.5
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 4.3e-53 212.6 357 46.5
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 7.4e-53 211.8 373 45.8
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.3e-52 211.1 387 44.4
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 2.1e-52 210.3 327 48.6
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 2.1e-52 210.3 384 42.4
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 2.8e-52 209.9 328 51.8
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.6e-52 209.5 330 46.4
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.4e-51 207.6 358 44.4
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 2.4e-51 206.8 240 59.2
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 6.9e-51 205.3 348 46.3
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 9.0e-51 204.9 367 54.0
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 3.4e-50 203.0 356 47.2
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 3.8e-49 199.5 357 45.7
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.1e-48 198.0 352 43.2
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.5e-47 193.0 243 68.3
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 8.7e-46 188.3 373 42.1
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 4.3e-45 186.0 230 58.7
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.6e-44 184.1 372 42.7
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 6.2e-44 182.2 231 53.7
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.8e-43 180.6 352 43.2
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 1.8e-43 180.6 362 48.1
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 4.0e-43 179.5 346 41.6
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 4.5e-42 176.0 365 44.4
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 7.6e-42 175.3 279 44.1
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.7e-41 174.1 365 43.8
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.2e-41 173.7 323 40.6
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.1e-40 171.4 96 99.0
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.4e-40 171.0 242 59.5
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.5e-40 170.2 314 41.1
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 3.5e-39 166.4 295 46.8
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 1.3e-38 164.5 367 44.1
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 2.5e-37 160.2 241 49.4
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.1e-35 153.3 271 45.4
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.5e-32 143.7 238 47.9
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 2.1e-31 140.6 337 38.6
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.8e-28 130.2 172 47.1
TPR.G34759 Trifolium pratense HOM05D006889 ORTHO05D008614 1.2e-26 124.8 63 95.2
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 2.9e-25 120.2 64 100.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 5.0e-25 119.4 302 33.4
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 8.5e-25 118.6 195 42.1
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 3.2e-24 116.7 95 67.4
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.2e-24 116.3 362 39.0
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.3e-20 104.8 152 53.9
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 5.3e-19 99.4 176 42.6
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 1.5e-18 97.8 66 81.8
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.6e-18 97.1 283 29.7
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 8.2e-12 75.5 195 42.6
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.1e-11 75.1 54 68.5
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.5e-09 65.5 64 59.4
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 4.2e-08 63.2 240 40.8
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 6.1e-07 59.3 183 32.2
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.8e-06 57.8 183 31.7


User provided reference genes

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