Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 1.0e-226 790.0 490 100.0
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 2.2e-181 639.4 417 90.9
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 7.2e-164 581.3 421 83.8
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 2.6e-161 572.8 420 82.9
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 2.2e-160 569.7 493 74.6
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 2.7e-150 536.2 426 78.6
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 2.6e-145 519.6 420 77.4
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 2.3e-141 506.5 389 79.4
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 4.0e-138 495.7 399 87.2
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 2.2e-136 490.0 424 71.5
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 8.6e-133 478.0 422 66.6
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 8.0e-131 471.5 420 67.6
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 5.2e-130 468.8 418 65.8
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 5.8e-129 465.3 427 68.9
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 7.5e-129 464.9 423 68.8
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 1.3e-128 464.2 419 68.3
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 1.3e-128 464.2 424 66.0
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 4.9e-128 462.2 431 64.3
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 7.0e-127 458.4 429 68.8
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 9.2e-127 458.0 423 67.8
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 1.6e-126 457.2 425 68.7
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 2.0e-126 456.8 427 66.3
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 2.7e-126 456.4 487 62.0
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 6.0e-126 455.3 424 66.0
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.3e-125 454.1 425 67.8
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 1.7e-125 453.8 432 63.4
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 1.7e-125 453.8 420 65.2
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 6.6e-125 451.8 426 63.8
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 8.6e-125 451.4 426 67.4
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 8.6e-125 451.4 423 64.8
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.1e-124 451.1 429 66.2
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 1.5e-124 450.7 429 64.1
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 3.3e-124 449.5 431 63.1
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 4.3e-124 449.1 425 67.3
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 1.6e-123 447.2 432 62.7
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 1.6e-123 447.2 427 66.3
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 1.6e-123 447.2 436 65.4
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 1.4e-122 444.1 490 62.9
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 1.8e-122 443.7 434 65.2
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 5.2e-122 442.2 423 65.2
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 5.2e-122 442.2 424 68.4
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 3.4e-121 439.5 425 65.9
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 4.4e-121 439.1 429 66.9
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 7.5e-121 438.3 430 61.2
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 1.3e-120 437.6 435 62.1
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 2.2e-120 436.8 425 67.5
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 2.9e-120 436.4 443 61.6
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 3.7e-120 436.0 423 66.4
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 8.3e-120 434.9 417 66.4
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 3.2e-119 433.0 424 67.2
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 3.2e-119 433.0 426 65.3
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 7.1e-119 431.8 425 65.9
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 7.1e-119 431.8 421 66.0
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 3.5e-118 429.5 432 65.5
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.5e-118 429.5 431 65.4
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 6.0e-118 428.7 420 66.0
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 3.9e-117 426.0 431 63.6
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.5e-116 424.1 381 70.1
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 1.6e-115 420.6 424 65.3
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 2.8e-115 419.9 429 65.0
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 4.7e-115 419.1 426 64.1
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 6.2e-115 418.7 427 65.3
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 1.4e-114 417.5 432 64.6
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 2.3e-114 416.8 608 49.3
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 3.1e-114 416.4 425 64.5
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 4.0e-114 416.0 442 64.3
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 4.0e-114 416.0 442 64.3
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 5.2e-114 415.6 428 63.3
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.7e-112 410.6 425 63.8
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 8.4e-112 408.3 420 64.8
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 3.2e-111 406.4 426 62.9
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 4.1e-111 406.0 442 60.6
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 9.2e-111 404.8 427 64.9
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 4.6e-110 402.5 419 65.2
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 1.0e-109 401.4 429 63.4
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 6.6e-109 398.7 427 62.5
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 1.5e-108 397.5 440 59.1
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 2.8e-107 393.3 419 61.1
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 8.1e-107 391.7 408 62.3
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 8.1e-107 391.7 458 55.5
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 8.1e-107 391.7 438 58.4
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 1.1e-106 391.3 291 77.0
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 2.0e-105 387.1 427 63.2
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 5.8e-105 385.6 417 60.7
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.7e-104 384.0 425 63.5
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 2.7e-102 376.7 414 60.1
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 1.1e-100 371.3 426 60.6
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 6.2e-99 365.5 370 65.4
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 6.4e-96 355.5 424 60.6
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 1.1e-90 338.2 422 52.6
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 4.5e-89 332.8 292 67.1
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 7.6e-89 332.0 435 52.2
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 7.6e-89 332.0 435 52.2
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 9.9e-89 331.6 385 54.5
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 1.2e-86 324.7 429 54.5
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 1.6e-83 314.3 427 56.2
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 2.8e-83 313.5 293 61.8
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 3.1e-82 310.1 418 49.8
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 3.1e-82 310.1 349 55.9
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 1.2e-81 308.1 391 57.5
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.9e-79 300.8 295 62.0
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 7.4e-76 288.9 287 62.0
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 9.0e-74 282.0 284 60.6
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 3.4e-73 280.0 284 61.6
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 3.8e-72 276.6 425 48.5
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 3.0e-69 266.9 625 40.8
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 1.9e-68 264.2 329 57.4
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 2.2e-67 260.8 354 49.4
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 1.5e-65 254.6 191 70.2
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 9.1e-58 228.8 426 49.1
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 8.5e-56 222.2 314 50.6
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 1.4e-55 221.5 335 49.3
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 8.2e-51 205.7 367 51.8
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 5.3e-50 203.0 265 65.7
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 2.9e-48 197.2 493 41.0
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 1.2e-41 175.3 177 70.1
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 2.4e-34 151.0 103 74.8
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 1.0e-32 145.6 87 82.8
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 4.0e-29 133.7 324 46.6
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 1.5e-28 131.7 195 48.2
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 2.0e-28 131.3 376 29.0
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.4e-28 130.6 119 62.2
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 3.7e-27 127.1 178 65.2
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 5.6e-23 113.2 74 75.7
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 4.7e-22 110.2 97 86.6
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.8e-21 108.2 86 69.8
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.5e-20 105.1 52 92.3
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 4.4e-20 103.6 95 85.3
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 3.0e-16 90.9 61 70.5
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 1.1e-15 89.0 103 50.5
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.2e-12 79.0 63 65.1
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 7.5e-12 76.3 96 51.0
C06p31420 Brassica napus HOM05D005481 ORTHO05D006779 3.7e-11 73.9 93 49.5
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 3.7e-11 73.9 176 30.7
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 4.6e-09 67.0 47 72.3
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 8.6e-08 62.8 87 43.7
C09p44560 Brassica napus HOM05D041588 ORTHO05D006779 7.3e-07 59.7 65 56.9
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 1.2e-06 58.9 39 76.9


User provided reference genes

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