Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 2.0e-89 332.4 170 100.0
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 4.7e-86 321.2 170 96.5
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 4.7e-86 321.2 170 96.5
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 96.5
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 96.5
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 95.3
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 1.8e-85 319.3 170 95.9
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 2.3e-85 318.9 171 96.5
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 95.3
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 95.3
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 95.3
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 3.9e-85 318.2 171 96.5
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 3.9e-85 318.2 168 96.4
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 6.7e-85 317.4 170 95.3
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 8.8e-85 317.0 170 94.7
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.1e-84 316.6 170 94.1
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 94.1
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 95.3
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.0e-84 315.8 168 95.2
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 2.0e-84 315.8 168 95.2
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 2.0e-84 315.8 168 95.2
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 2.0e-84 315.8 170 93.5
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 94.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.1
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.7
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 93.5
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 3.3e-84 315.1 170 94.1
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 93.5
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 93.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 93.5
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.1
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 93.5
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 94.7
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 93.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 9.7e-84 313.5 170 93.5
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.3e-83 313.2 170 92.9
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 93.5
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 1.7e-83 312.8 170 93.5
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 2.2e-83 312.4 170 92.9
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.2e-83 312.4 170 93.5
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.4
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 92.9
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.1e-82 310.1 167 92.2
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.1e-82 310.1 168 93.5
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 92.9
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 91.8
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.4e-82 309.7 170 92.4
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.8
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.8e-82 309.3 183 89.6
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.8e-82 309.3 176 92.0
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 1.8e-82 309.3 170 91.8
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 3.1e-82 308.5 170 91.2
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 4.1e-82 308.1 170 91.8
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 5.3e-82 307.8 170 91.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 5.3e-82 307.8 170 91.2
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 5.3e-82 307.8 170 91.2
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 7.0e-82 307.4 183 89.1
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 7.0e-82 307.4 170 91.2
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 1.2e-81 306.6 170 91.2
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.0e-81 305.8 169 91.1
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 2.0e-81 305.8 170 90.6
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.0e-80 303.5 167 91.0
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.0e-80 303.5 166 91.0
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.7e-80 302.8 170 91.8
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 5.0e-80 301.2 170 88.2
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 8.5e-80 300.4 166 93.4
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 8.5e-80 300.4 170 92.4
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.5e-79 299.7 190 85.3
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 4.2e-79 298.1 187 82.9
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 7.2e-79 297.4 166 92.2
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 4.7e-78 294.7 167 89.2
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 4.0e-77 291.6 157 93.0
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 5.2e-77 291.2 168 85.7
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 8.8e-77 290.4 157 93.6
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 1.3e-75 286.6 166 86.1
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.7e-75 285.0 174 87.9
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.1e-74 283.5 162 89.5
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.1e-74 283.5 151 94.7
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 4.1e-74 281.6 147 97.3
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 4.1e-74 281.6 149 95.3
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 4.1e-74 281.6 151 93.4
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.2e-73 280.0 164 86.0
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.8e-72 275.0 147 94.6
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 1.2e-70 270.0 147 93.2
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 8.0e-70 267.3 168 76.8
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.5e-68 263.1 140 93.6
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.7e-67 259.6 136 95.6
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 3.7e-67 258.5 138 94.2
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 6.3e-67 257.7 140 91.4
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.4e-66 256.5 136 94.1
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 3.1e-66 255.4 170 79.4
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.1e-66 255.0 262 58.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 3.5e-65 251.9 164 81.1
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 2.7e-62 242.3 128 96.1
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 3.6e-62 241.9 170 76.5
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 3.6e-62 241.9 170 77.6
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 1.4e-61 240.0 130 94.6
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 4.0e-61 238.4 167 76.0
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.4e-58 229.2 229 62.0
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 2.7e-57 225.7 125 93.6
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.0e-56 221.5 120 95.0
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.0e-56 221.5 120 95.0
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 5.0e-56 221.5 233 57.1
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 5.6e-55 218.0 129 85.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 2.9e-51 205.7 169 60.9
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.8e-50 203.0 108 95.4
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 2.4e-50 202.6 110 92.7
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.3e-43 180.3 115 82.6
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.7e-43 179.9 176 52.8
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.9e-39 166.4 170 57.1
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 4.6e-33 145.2 117 67.5
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 3.0e-32 142.5 75 94.7
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 5.1e-32 141.7 75 94.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 2.5e-31 139.4 76 89.5
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 9.2e-26 120.9 73 82.2
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 3.0e-24 115.9 90 70.0
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.1e-23 114.0 60 91.7
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 2.1e-17 93.2 47 93.6
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.5e-12 75.5 38 86.8
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.2e-09 67.4 39 79.5
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 4.3e-07 58.9 46 69.6


User provided reference genes

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