Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11825 Trifolium pratense HOM05D007763 ORTHO05D009537 7.4e-101 372.1 548 100.0
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 5.2e-54 216.5 157 74.5
Psat5g201000 Pisum sativum HOM05D007763 ORTHO05D009537 8.6e-33 146.0 157 54.8
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 4.3e-32 143.7 165 55.8
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 1.1e-30 139.0 155 54.8
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 2.0e-21 108.2 115 52.2
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 2.6e-21 107.8 115 51.3
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 1.8e-17 95.1 125 43.2
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 1.8e-17 95.1 102 45.1
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 2.3e-17 94.7 127 44.9
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 6.7e-17 93.2 104 47.1
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 8.7e-17 92.8 197 35.5
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 1.9e-16 91.7 114 43.9
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 2.5e-16 91.3 145 37.9
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 2.5e-16 91.3 113 46.9
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 1.3e-15 89.0 127 44.1
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.3e-15 89.0 145 37.2
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 3.6e-15 87.4 127 42.5
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 3.6e-15 87.4 145 36.6
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 4.8e-15 87.0 144 36.8
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 4.8e-15 87.0 137 40.1
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 6.2e-15 86.7 145 36.6
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 8.1e-15 86.3 145 36.6
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 1.4e-14 85.5 142 42.3
CDE04G3021 Ceratophyllum demersum HOM05D007763 ORTHO05D000003 1.4e-14 85.5 114 44.7
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 1.4e-14 85.5 104 40.4
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 1.4e-14 85.5 142 39.4
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 3.1e-14 84.3 104 40.4
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 4.0e-14 84.0 144 36.1
MBI02_g14230_MAGBIO Magnolia biondii HOM05D007763 ORTHO05D011706 5.3e-14 83.6 145 38.6
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 9.0e-14 82.8 107 42.1
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 2.0e-13 81.6 150 38.0
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 2.0e-13 81.6 74 51.4
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 2.6e-13 81.3 134 36.6
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 2.6e-13 81.3 118 41.5
Cfa018915 Carpinus fangiana HOM05D007763 ORTHO05D009537 3.4e-13 80.9 146 37.7
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 3.4e-13 80.9 157 38.9
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 3.4e-13 80.9 145 36.6
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 9.9e-13 79.3 158 36.7
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 2.2e-12 78.2 153 35.3
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 3.8e-12 77.4 145 35.2
MELO3C025502.2 Cucumis melo HOM05D007763 ORTHO05D009537 3.8e-12 77.4 116 36.2
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 1.1e-11 75.9 162 36.4
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 1.4e-11 75.5 148 38.5
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 1.4e-11 75.5 102 43.1
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 1.9e-11 75.1 145 34.5
Medtr3g037490 Medicago truncatula HOM05D007763 ORTHO05D009537 2.4e-11 74.7 160 37.5
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 5.5e-11 73.6 105 42.9
Aqoxy2G01348 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 7.1e-11 73.2 104 35.6
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 9.3e-11 72.8 104 38.5
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 2.1e-10 71.6 105 41.9
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 2.1e-10 71.6 105 41.9
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 2.1e-10 71.6 141 33.3
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 2.1e-10 71.6 63 58.7
arahy.Tifrunner.gnm1.ann1.TF3CHY Arachis hypogaea HOM05D000981 ORTHO05D000845 2.7e-10 71.2 41 75.6
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 2.7e-10 71.2 87 41.4
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 3.5e-10 70.9 102 38.2
CsaV3_5G025970 Cucumis sativus L. HOM05D007763 ORTHO05D009537 3.5e-10 70.9 140 32.1
Hund02629 Selenicereus undatus HOM05D007763 ORTHO05D019789 7.9e-10 69.7 60 50.0
ClCG09G020450 Citrullus lanatus HOM05D007763 ORTHO05D009537 1.3e-09 68.9 141 32.6
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 3.0e-09 67.8 93 39.8
Zm00001eb312410 Zea mays HOM05D007763 ORTHO05D009537 3.9e-09 67.4 73 46.6
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 5.1e-09 67.0 104 40.4
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 6.7e-09 66.6 135 35.6
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 2.5e-08 64.7 102 35.3
Os09g0417500 Oryza sativa ssp. japonica HOM05D007763 ORTHO05D009537 3.3e-08 64.3 70 45.7
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 7.4e-08 63.2 102 37.3
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 9.6e-08 62.8 108 35.2
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 4.8e-07 60.5 102 34.3
BcaC04g23452 Brassica carinata HOM05D007763 ORTHO05D009537 1.4e-06 58.9 116 31.0
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 1.4e-06 58.9 134 32.1
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 5.3e-06 57.0 144 29.2


User provided reference genes

Program Settings