Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 9.5e-178 626.7 310 100.0
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 6.8e-144 514.2 317 83.0
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 4.7e-137 491.5 317 78.5
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 5.2e-136 488.0 317 77.9
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 7.6e-135 484.2 282 87.9
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 1.7e-134 483.0 319 77.1
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 4.9e-134 481.5 316 76.3
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 1.3e-126 456.8 312 73.7
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 2.2e-126 456.1 308 74.4
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 1.1e-120 437.2 306 72.2
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 3.1e-120 435.6 313 71.2
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 6.9e-120 434.5 312 69.9
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 1.5e-119 433.3 305 69.2
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 1.7e-118 429.9 306 70.6
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.2e-118 429.5 300 70.0
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.2e-118 429.5 300 70.0
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.4e-117 426.8 304 70.4
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 1.9e-117 426.4 300 72.3
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 2.4e-117 426.0 306 70.6
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 3.2e-117 425.6 297 72.1
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 5.5e-117 424.9 310 68.7
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 5.5e-117 424.9 308 68.8
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 3.0e-115 419.1 308 69.2
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 5.6e-114 414.8 261 77.0
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.1e-112 410.6 306 67.0
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 5.3e-112 408.3 308 68.2
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 5.3e-112 408.3 303 68.0
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 9.0e-112 407.5 282 72.7
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.5e-111 406.8 308 66.2
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 2.6e-111 406.0 261 77.0
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 3.4e-111 405.6 304 66.1
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 3.8e-110 402.1 309 66.3
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 6.5e-110 401.4 311 64.3
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 1.1e-109 400.6 309 66.3
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 1.4e-109 400.2 294 66.3
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 3.2e-109 399.1 305 65.9
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 5.5e-109 398.3 292 68.2
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 7.1e-109 397.9 306 65.0
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 7.1e-109 397.9 276 73.6
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 9.3e-109 397.5 306 67.3
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 1.6e-108 396.7 303 64.4
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.6e-108 396.7 304 64.8
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 2.7e-108 396.0 309 64.7
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 2.7e-108 396.0 303 65.7
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 3.5e-108 395.6 284 68.3
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 4.6e-108 395.2 293 66.2
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 6.0e-108 394.8 320 63.8
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 7.9e-108 394.4 267 70.8
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 2.3e-107 392.9 263 73.0
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 3.9e-107 392.1 319 62.7
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 6.7e-107 391.3 294 64.3
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 1.9e-106 389.8 301 65.1
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 2.5e-106 389.4 283 66.1
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 2.5e-106 389.4 314 64.3
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.7e-106 388.3 297 65.3
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 6.3e-105 384.8 301 65.8
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 8.2e-105 384.4 255 75.3
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 8.2e-105 384.4 297 64.3
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 1.1e-104 384.0 299 63.2
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.8e-104 383.3 309 61.8
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 2.4e-104 382.9 303 64.4
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 4.1e-104 382.1 306 62.4
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 5.3e-104 381.7 260 70.4
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 9.0e-104 380.9 302 60.6
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 2.0e-103 379.8 340 59.1
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 3.4e-103 379.0 334 59.3
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.0e-102 377.5 293 65.5
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.7e-102 376.7 260 70.4
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.8e-102 375.6 299 62.2
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 6.5e-102 374.8 304 60.9
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 1.4e-101 373.6 316 60.1
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.4e-101 373.6 302 60.9
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 2.5e-101 372.9 306 64.4
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 3.2e-101 372.5 260 69.6
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 1.0e-99 367.5 296 62.5
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 2.3e-99 366.3 300 62.0
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 3.0e-99 365.9 264 68.6
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 8.7e-99 364.4 303 60.4
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 8.7e-99 364.4 303 63.0
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 2.5e-98 362.8 251 68.1
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 2.5e-98 362.8 307 59.9
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 4.3e-98 362.1 339 56.3
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 1.3e-97 360.5 315 58.4
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 2.2e-97 359.8 297 62.3
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 6.9e-96 354.8 280 63.6
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 7.7e-95 351.3 274 63.5
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.7e-94 350.1 299 63.9
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 1.9e-93 346.7 310 58.1
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 5.5e-93 345.1 298 57.4
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 9.4e-93 344.4 249 69.1
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 2.1e-92 343.2 307 60.3
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 6.7e-91 338.2 308 56.5
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.5e-90 337.0 259 63.7
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 8.2e-89 331.3 260 61.2
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 9.1e-88 327.8 192 84.9
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 5.2e-83 312.0 326 52.5
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 9.7e-82 307.8 273 53.8
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 1.7e-81 307.0 321 51.4
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.2e-79 300.8 243 61.3
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 5.9e-79 298.5 373 50.9
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.9e-77 293.5 237 61.6
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 8.0e-76 288.1 250 60.0
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 1.5e-74 283.9 241 61.0
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 3.1e-72 276.2 174 78.2
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.0e-71 273.5 213 66.2
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 8.3e-65 251.5 169 75.7
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 9.1e-64 248.1 263 51.0
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 7.7e-63 245.0 165 72.7
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 7.7e-63 245.0 317 43.2
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 4.2e-61 239.2 261 47.1
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 3.1e-56 223.0 164 69.5
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 1.6e-55 220.7 281 41.6
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.1e-53 214.5 146 71.9
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 2.4e-48 196.8 210 52.9
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 1.3e-46 191.0 129 76.0
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 6.0e-39 165.6 126 70.6
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 7.3e-37 158.7 144 59.0
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 1.4e-32 144.4 279 32.6
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.0e-30 136.7 155 51.6
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.2e-28 131.3 85 72.9
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 3.6e-28 129.8 172 47.7
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.7e-28 129.4 97 63.9
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 6.2e-28 129.0 168 47.6
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.3e-25 121.3 82 67.1
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 4.9e-25 119.4 209 35.4
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 2.1e-23 114.0 283 32.2
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 3.5e-23 113.2 77 72.7
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 1.7e-22 110.9 65 76.9
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-22 110.9 71 74.6
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 7.1e-08 62.4 91 39.6


User provided reference genes

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