Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 8.6e-100 367.1 197 100.0
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.7e-76 289.7 195 81.0
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 2.8e-74 282.3 196 83.7
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 4.7e-74 281.6 193 80.3
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 1.5e-67 260.0 194 78.4
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 6.9e-65 251.1 197 73.6
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.6e-48 196.1 198 63.6
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 1.3e-42 177.2 194 58.8
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 3.4e-40 169.1 195 57.4
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.0e-39 167.5 193 58.0
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 5.5e-38 161.8 193 57.5
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 6.1e-37 158.3 197 54.3
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 1.3e-36 157.1 193 53.9
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 1.8e-36 156.8 196 54.1
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.3e-36 156.4 193 57.5
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 8.7e-36 154.5 193 55.4
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.1e-35 154.1 193 51.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 5.7e-35 151.8 193 51.3
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.3e-34 150.6 194 51.5
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 4.8e-34 148.7 194 50.5
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.1e-33 147.5 202 51.0
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 1.4e-33 147.1 201 51.2
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 1.4e-33 147.1 199 50.3
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.2e-32 144.1 199 48.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.2e-32 144.1 201 49.3
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 2.0e-32 143.3 189 50.3
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.0e-32 143.3 196 52.0
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 3.4e-32 142.5 189 49.7
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 3.4e-32 142.5 195 52.8
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 4.5e-32 142.1 188 50.0
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 5.9e-32 141.7 198 49.5
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.3e-31 140.6 228 47.4
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.3e-31 140.6 194 49.5
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 2.9e-31 139.4 197 49.7
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 6.5e-31 138.3 211 46.0
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 6.5e-31 138.3 202 46.0
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 8.5e-31 137.9 197 48.7
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.4e-30 137.1 211 45.5
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.4e-30 137.1 203 46.8
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.9e-30 136.7 192 49.0
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 3.2e-30 136.0 200 47.0
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 4.2e-30 135.6 196 50.5
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.5e-30 135.2 215 44.2
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.5e-30 135.2 215 44.2
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 9.4e-30 134.4 217 44.2
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 2.7e-29 132.9 195 49.2
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 3.6e-29 132.5 206 46.1
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.4e-28 130.6 206 47.1
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.4e-28 130.6 190 49.5
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 2.3e-28 129.8 199 46.7
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 3.0e-28 129.4 197 47.2
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 3.0e-28 129.4 198 47.5
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 5.7e-27 125.2 200 46.0
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 5.7e-27 125.2 201 45.8
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 9.7e-27 124.4 182 45.1
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 9.7e-27 124.4 207 44.4
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 2.8e-26 122.9 213 44.1
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 1.4e-25 120.6 197 43.7
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 1.2e-24 117.5 197 42.1
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 2.0e-24 116.7 198 46.0
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 2.0e-24 116.7 190 45.3
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.0e-24 116.7 193 44.0
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 3.4e-24 115.9 195 42.6
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 4.5e-24 115.5 193 44.6
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 7.7e-24 114.8 195 40.5
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 2.2e-23 113.2 195 43.6
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 8.5e-23 111.3 201 41.3
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.1e-22 110.9 201 43.8
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.4e-22 110.5 197 42.6
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 2.5e-22 109.8 214 43.0
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.2e-21 107.5 220 41.8
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 3.6e-21 105.9 195 42.1
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 2.3e-20 103.2 194 42.8
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 3.9e-20 102.4 177 42.9
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 1.5e-19 100.5 193 41.5
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 5.7e-19 98.6 199 40.7
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 7.4e-19 98.2 190 39.5
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 7.4e-19 98.2 171 42.7
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 8.2e-18 94.7 199 40.7
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 4.1e-17 92.4 155 43.9
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 3.5e-16 89.4 188 36.7
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 7.7e-16 88.2 191 37.7
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 1.0e-15 87.8 191 38.2
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 3.8e-15 85.9 97 55.7
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 3.8e-15 85.9 194 35.1
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 7.2e-14 81.6 229 35.4
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 7.2e-14 81.6 191 39.3
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 2.1e-13 80.1 160 40.0
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 2.7e-13 79.7 152 45.4
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 2.0e-11 73.6 154 37.7
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 2.0e-11 73.6 199 32.7
Glyma.02G293000 Glycine max HOM05D007542 ORTHO05D009519 5.7e-11 72.0 119 47.1
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 9.7e-11 71.2 148 33.8
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 6.3e-10 68.6 98 46.9
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.5e-06 57.4 179 30.7


User provided reference genes

Program Settings