Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 7.6e-183 643.7 316 100.0
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 1.5e-159 566.2 308 90.6
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 1.1e-157 560.1 309 90.0
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 9.7e-154 547.0 313 84.7
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 2.2e-153 545.8 311 85.2
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 7.0e-152 540.8 309 85.8
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 4.5e-151 538.1 311 83.6
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 1.3e-150 536.6 309 85.1
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 1.2e-148 530.0 311 83.9
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 3.6e-148 528.5 307 84.7
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 4.7e-148 528.1 312 81.7
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 1.0e-147 526.9 312 81.4
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 1.4e-147 526.6 310 82.9
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 2.6e-146 522.3 313 82.4
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 1.3e-145 520.0 312 81.4
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 1.3e-145 520.0 308 83.4
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 1.4e-144 516.5 312 82.4
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 8.5e-142 507.3 308 81.2
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 1.1e-141 506.9 308 81.2
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 3.2e-141 505.4 309 79.6
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 2.7e-140 502.3 312 79.2
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 2.7e-140 502.3 309 80.9
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 6.1e-140 501.1 311 78.5
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 1.0e-139 500.4 311 78.8
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.8e-139 499.6 312 79.5
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.8e-139 499.6 312 79.5
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 1.8e-139 499.6 306 78.8
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 2.3e-139 499.2 309 78.6
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 3.0e-139 498.8 310 78.7
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 5.2e-139 498.0 308 78.9
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 1.2e-138 496.9 311 77.8
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 1.5e-138 496.5 312 78.2
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 1.5e-138 496.5 312 76.9
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 4.4e-138 495.0 309 78.0
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 4.4e-138 495.0 309 79.3
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 5.7e-138 494.6 311 77.5
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 5.7e-138 494.6 312 76.9
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 5.7e-138 494.6 311 77.2
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 9.7e-138 493.8 313 77.3
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 1.7e-137 493.0 310 78.4
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 2.8e-137 492.3 313 78.3
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 3.7e-137 491.9 312 77.6
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 4.8e-137 491.5 311 78.5
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 4.8e-137 491.5 312 77.6
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 8.3e-137 490.7 310 78.1
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 1.1e-136 490.3 312 77.6
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.1e-136 488.8 311 78.1
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 3.1e-136 488.8 310 78.1
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 5.3e-136 488.0 311 78.1
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 5.3e-136 488.0 301 78.7
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 1.2e-135 486.9 318 76.4
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 2.7e-135 485.7 308 76.9
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 4.5e-135 485.0 312 76.9
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 4.5e-135 485.0 312 75.0
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.9e-135 484.6 305 78.0
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.7e-135 484.2 311 77.5
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 7.7e-135 484.2 310 77.1
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 1.0e-134 483.8 308 78.2
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 1.1e-133 480.3 312 74.7
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 1.5e-133 479.9 333 72.7
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 1.9e-133 479.6 312 75.6
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 4.2e-133 478.4 309 77.0
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 7.2e-133 477.6 308 75.0
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 9.4e-133 477.2 310 76.8
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 1.2e-132 476.9 312 74.7
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 1.2e-132 476.9 312 76.3
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 2.1e-132 476.1 310 75.5
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 2.7e-132 475.7 312 76.3
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 4.7e-132 474.9 312 75.3
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 4.7e-132 474.9 312 75.3
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 1.0e-131 473.8 310 75.2
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 2.3e-131 472.6 310 76.1
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 4.0e-131 471.9 322 73.0
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 6.8e-131 471.1 315 74.9
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 1.2e-130 470.3 308 75.6
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 3.4e-130 468.8 313 73.5
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 2.8e-129 465.7 317 73.2
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 3.7e-129 465.3 319 72.1
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 1.1e-128 463.8 308 74.0
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 2.4e-128 462.6 319 70.8
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 2.4e-128 462.6 319 71.2
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 2.4e-128 462.6 324 71.3
arahy.Tifrunner.gnm1.ann1.8Z0BSJ Arachis hypogaea HOM05D003958 ORTHO05D004864 5.4e-128 461.5 312 74.0
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 1.6e-127 459.9 310 73.5
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 5.9e-127 458.0 308 74.4
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 2.3e-126 456.1 282 79.1
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 8.6e-126 454.1 319 70.2
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 8.6e-126 454.1 310 72.6
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 1.9e-125 453.0 321 69.8
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 1.9e-125 453.0 310 71.6
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 3.3e-125 452.2 329 69.6
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 4.2e-125 451.8 315 70.2
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 7.2e-125 451.1 321 69.5
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 7.2e-125 451.1 321 69.5
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 3.6e-124 448.7 311 72.0
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 3.6e-124 448.7 309 71.2
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 1.4e-123 446.8 328 67.7
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 1.8e-123 446.4 282 76.6
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.0e-123 445.3 291 75.6
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 4.0e-123 445.3 332 68.4
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.2e-122 443.7 299 73.6
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 9.8e-122 440.7 280 77.5
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 1.1e-120 437.2 316 68.7
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 9.2e-120 434.1 268 78.4
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 1.1e-117 427.2 311 69.5
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 2.3e-115 419.5 323 65.6
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 2.0e-114 416.4 324 64.8
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 2.6e-114 416.0 320 65.0
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 1.7e-113 413.3 263 74.9
Gorai.013G008200 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.0e-111 406.4 305 67.9
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 1.7e-110 403.3 231 85.3
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 3.9e-110 402.1 308 66.6
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 3.1e-107 392.5 311 66.2
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 8.9e-107 391.0 223 84.8
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 1.5e-101 373.6 227 78.4
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 2.1e-100 369.8 316 62.3
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 4.7e-100 368.6 315 60.0
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 3.1e-99 365.9 337 56.1
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.5e-98 363.6 311 61.4
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 2.6e-98 362.8 305 62.0
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 5.8e-98 361.7 335 56.4
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 1.6e-92 343.6 222 79.3
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 3.6e-92 342.4 204 84.3
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 5.8e-82 308.5 256 60.9
SGA_v2.0_scaffold34G13865 Striga asiatica HOM05D003958 ORTHO05D004864 1.1e-80 304.3 320 54.1
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 1.1e-77 294.3 207 70.5
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 2.1e-76 290.0 165 86.1
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 2.4e-72 276.6 238 58.4
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 7.9e-71 271.6 312 47.8
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 1.1e-69 267.7 156 81.4
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 2.8e-68 263.1 171 80.1
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 2.2e-65 253.4 150 81.3
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 1.9e-64 250.4 348 42.8
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 9.6e-61 238.0 170 67.1
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.3e-59 232.3 134 84.3
Ah.07g203280 Amaranthus hybridus HOM05D003958 ORTHO05D004864 6.7e-54 215.3 164 64.6
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 5.3e-51 205.7 294 39.5
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.6e-50 203.4 112 88.4
Gohir.A01G232100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.4e-48 197.6 116 82.8
Gorai.007G380200 Gossypium raimondii HOM05D003958 ORTHO05D004864 7.2e-48 195.3 116 81.9
BcaC01g04875 Brassica carinata HOM05D003958 ORTHO05D004864 9.4e-48 194.9 241 49.0
Gohir.D11G349300 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.2e-47 194.5 124 75.8
Gorai.004G293900 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.6e-47 194.1 124 75.8
Gorai.006G274500 Gossypium raimondii HOM05D003958 ORTHO05D004864 2.1e-47 193.7 122 77.0
Sopen06g018800 Solanum pennellii HOM05D003958 ORTHO05D004864 2.1e-47 193.7 123 78.0
Gohir.D08G275428 Gossypium hirsutum HOM05D003958 ORTHO05D004864 6.1e-47 192.2 124 75.0
Gohir.D09G250100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.9e-47 191.8 113 82.3
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.4e-46 191.0 122 76.2
Gohir.D01G222101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.8e-46 190.7 113 82.3
Gohir.D03G178200 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.0e-45 187.2 113 79.6
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 5.0e-41 172.6 289 42.6
FAN14G4368 Fragaria x ananassa HOM05D000001 ORTHO05D000003 1.4e-40 171.0 156 55.1
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.4e-40 171.0 93 88.2
Gohir.1Z049515 Gossypium hirsutum HOM05D003958 ORTHO05D015143 3.9e-38 162.9 97 80.4
Gorai.006G275300 Gossypium raimondii HOM05D003958 ORTHO05D015143 6.7e-38 162.2 97 80.4
Gorai.001G000100 Gossypium raimondii HOM05D003958 ORTHO05D004864 6.1e-31 139.0 84 78.6
Atru.chr6.2248 Acer truncatum HOM05D003958 ORTHO05D004864 3.0e-30 136.7 92 69.6
FAN05G2568 Fragaria x ananassa HOM05D003958 ORTHO05D004864 3.0e-30 136.7 138 52.9
C03p32750 Brassica napus HOM05D003958 ORTHO05D004864 2.6e-26 123.6 119 54.6
BolC3t15610H Brassica oleracea HOM05D003958 ORTHO05D004864 2.6e-26 123.6 119 54.6
Medtr2g014570 Medicago truncatula HOM05D003958 ORTHO05D004864 2.0e-21 107.5 66 80.3
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.5e-21 105.5 63 81.0
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.7e-20 104.4 63 81.0
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 3.7e-20 103.2 74 74.3
Gohir.D11G176600 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.4e-19 100.5 92 58.7
Gorai.013G272500 Gossypium raimondii HOM05D003958 ORTHO05D004864 4.1e-19 99.8 92 57.6
Gohir.D07G000766 Gossypium hirsutum HOM05D003958 ORTHO05D004864 9.1e-19 98.6 92 56.5
Nitab4.5_0001556g0020 Nicotiana tabacum HOM05D003958 ORTHO05D004864 2.0e-18 97.4 81 61.7
Gorai.007G000600 Gossypium raimondii HOM05D001392 ORTHO05D014312 5.9e-18 95.9 71 66.2
FAN05G2311 Fragaria x ananassa HOM05D003958 ORTHO05D004864 2.9e-17 93.6 109 45.9
Gohir.A02G000100 Gossypium hirsutum HOM05D003958 ORTHO05D005454 5.5e-16 89.4 47 83.0
Gohir.D08G275100 Gossypium hirsutum HOM05D003958 ORTHO05D005872 5.5e-16 89.4 50 80.0
Gorai.N025700 Gossypium raimondii HOM05D003958 ORTHO05D005872 5.5e-16 89.4 50 80.0
Gohir.1Z049564 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.6e-15 87.8 50 78.0
Gohir.1Z049570 Gossypium hirsutum HOM05D003958 ORTHO05D005872 1.6e-15 87.8 50 78.0
Solyc06g053690.3 Solanum lycopersicum HOM05D003958 ORTHO05D004864 1.8e-14 84.3 62 62.9
Oeu056467.1 Olea europaea HOM05D003958 ORTHO05D004864 2.2e-12 77.4 61 59.0
AL4G39060 Arabidopsis lyrata HOM05D000001 ORTHO05D009069 5.0e-09 66.2 128 37.5


User provided reference genes

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