Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 2.0e-275 951.8 490 100.0
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 3.5e-235 818.1 487 86.0
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 5.8e-230 800.8 487 83.6
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 1.3e-200 703.4 483 76.2
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 6.0e-195 684.5 479 72.9
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 2.4e-191 672.5 409 83.1
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 1.7e-189 666.4 452 73.9
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.7e-189 666.4 480 71.2
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 9.3e-188 660.6 480 71.0
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 3.8e-181 638.6 480 70.4
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 9.1e-167 590.9 489 63.8
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 3.2e-164 582.4 489 63.4
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 9.1e-151 537.7 457 60.0
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 1.7e-149 533.5 450 62.0
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 5.0e-149 531.9 445 62.7
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 3.6e-147 525.8 459 59.5
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 4.7e-147 525.4 453 59.8
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 9.8e-145 517.7 442 61.3
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 6.3e-144 515.0 438 59.4
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 8.3e-144 514.6 455 57.4
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 3.1e-143 512.7 491 55.6
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 9.1e-143 511.1 493 54.6
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 3.5e-142 509.2 498 55.6
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 1.0e-141 507.7 492 55.7
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 3.8e-141 505.8 420 60.7
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 1.5e-140 503.8 445 58.7
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 2.5e-140 503.1 445 58.0
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 1.2e-139 500.7 478 55.0
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 6.1e-139 498.4 486 54.5
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 8.0e-139 498.0 431 59.2
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 3.0e-138 496.1 466 54.7
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 1.3e-136 490.7 484 55.0
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 4.9e-136 488.8 455 56.7
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 3.5e-134 482.6 482 54.4
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 5.9e-134 481.9 480 52.1
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 2.3e-133 479.9 458 54.8
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 2.3e-133 479.9 482 53.7
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 3.9e-133 479.2 482 54.1
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 6.6e-133 478.4 428 59.8
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 2.5e-132 476.5 494 53.2
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 2.5e-132 476.5 457 55.1
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 4.7e-131 472.2 468 55.1
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.8e-130 470.3 455 53.8
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 4.1e-127 459.1 491 50.5
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 7.0e-127 458.4 449 51.9
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 9.2e-127 458.0 452 54.9
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 1.2e-126 457.6 491 50.5
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 4.6e-126 455.7 436 53.9
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 6.0e-126 455.3 491 49.9
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 6.0e-126 455.3 491 50.3
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 6.0e-126 455.3 442 52.9
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 1.0e-125 454.5 458 52.4
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.0e-125 454.5 492 50.8
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 3.0e-125 453.0 467 51.8
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.1e-124 451.1 446 50.9
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 4.7e-123 445.7 442 55.7
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 8.1e-123 444.9 437 52.6
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 2.3e-122 443.4 448 51.1
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 3.1e-122 443.0 445 53.5
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 3.1e-122 443.0 449 52.3
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 5.2e-122 442.2 437 53.3
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 6.8e-122 441.8 447 50.6
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 8.9e-122 441.4 459 50.3
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 1.5e-121 440.7 498 48.2
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 5.8e-121 438.7 457 49.2
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.7e-120 437.2 455 49.5
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 6.4e-120 435.3 429 55.5
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 6.4e-120 435.3 418 54.5
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 1.9e-119 433.7 444 50.7
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 4.1e-119 432.6 472 49.6
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 7.1e-119 431.8 441 49.7
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 1.2e-118 431.0 497 47.1
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.1e-118 430.3 434 51.4
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 1.5e-116 424.1 489 47.4
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 1.1e-114 417.9 451 51.4
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 4.4e-113 412.5 458 50.0
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.7e-112 410.6 432 49.8
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 6.4e-112 408.7 432 49.1
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 1.9e-111 407.1 416 51.0
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 3.2e-111 406.4 436 50.5
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 3.0e-109 399.8 471 45.6
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 3.0e-109 399.8 412 51.2
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.1e-108 397.9 372 54.8
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 9.6e-108 394.8 463 46.2
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 2.8e-107 393.3 433 49.7
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 7.6e-105 385.2 315 60.3
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 3.4e-97 359.8 427 45.4
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 1.4e-95 354.4 429 46.6
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 1.6e-94 350.9 432 46.3
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 2.1e-94 350.5 447 44.1
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 2.7e-94 350.1 358 51.1
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 2.0e-89 334.0 323 52.9
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.3e-84 316.6 282 58.5
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 1.6e-83 314.3 283 53.7
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.0e-77 295.0 445 40.7
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 5.3e-74 282.7 366 40.4
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.7e-72 277.7 295 47.8
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 2.6e-65 253.8 463 36.5
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 7.7e-65 252.3 282 46.8
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.4e-55 221.5 423 34.5
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 8.8e-53 212.2 233 47.2
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.8e-51 207.2 339 36.3
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 7.0e-50 202.6 447 32.2
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 1.4e-37 161.8 368 29.3
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 9.8e-36 155.6 78 98.7
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 1.1e-26 125.6 460 27.8
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 5.4e-26 123.2 210 34.3
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 9.5e-23 112.5 63 93.7
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 5.4e-18 96.7 91 60.4
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 3.5e-17 94.0 372 26.1
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 3.6e-14 84.0 67 62.7
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.3e-13 81.3 65 58.5
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 1.5e-12 78.6 89 50.6
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 9.8e-12 75.9 73 56.2
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 7.3e-07 59.7 72 47.2
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 7.3e-07 59.7 72 47.2


User provided reference genes

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