Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11693 Trifolium pratense HOM05D005280 ORTHO05D006253 1.7e-88 329.3 167 100.0
Lj6g0027668 Lotus japonicus HOM05D005280 ORTHO05D006253 3.8e-48 195.3 95 94.7
Lalb_Chr20g0117481 Lupinus albus HOM05D005280 ORTHO05D006253 5.5e-47 191.4 93 93.5
Manes.17G056200 Manihot esculenta HOM05D005280 ORTHO05D006253 4.6e-46 188.3 93 92.5
PGSC0003DMG400008719 Solanum tuberosum HOM05D005280 ORTHO05D006253 2.2e-43 179.5 95 85.3
MD10G1279400 Malus domestica HOM05D005280 ORTHO05D006253 2.8e-43 179.1 93 86.0
Potri.011G066600 Populus trichocarpa HOM05D005280 ORTHO05D006253 2.8e-43 179.1 93 87.1
Sc05g0007070 Simmondsia chinensis HOM05D005280 ORTHO05D006253 2.8e-43 179.1 93 86.0
AUR62015144 Chenopodium quinoa HOM05D005280 ORTHO05D006253 3.7e-43 178.7 95 83.2
AUR62017603 Chenopodium quinoa HOM05D005280 ORTHO05D006253 3.7e-43 178.7 95 83.2
MD05G1300300 Malus domestica HOM05D005280 ORTHO05D006253 3.7e-43 178.7 93 84.9
PGR042G3394 Punica granatum HOM05D005280 ORTHO05D006253 3.7e-43 178.7 93 86.0
TWI38G0304 Tripterygium wilfordii HOM05D005280 ORTHO05D006253 3.7e-43 178.7 93 84.9
CAN.G206.30 Capsicum annuum HOM05D005280 ORTHO05D006253 4.8e-43 178.3 95 84.2
Solyc03g062940.3 Solanum lycopersicum HOM05D005280 ORTHO05D006253 4.8e-43 178.3 95 84.2
Sopen03g015240 Solanum pennellii HOM05D005280 ORTHO05D006253 4.8e-43 178.3 95 84.2
ECA236G4327 Erigeron canadensis HOM05D005280 ORTHO05D006253 8.2e-43 177.6 93 82.8
PGSC0003DMG400009000 Solanum tuberosum HOM05D005280 ORTHO05D006253 8.2e-43 177.6 93 84.9
Peaxi162Scf00871g00047 Petunia axillaris HOM05D005280 ORTHO05D006253 1.1e-42 177.2 93 84.9
Ah.01g013480 Amaranthus hybridus HOM05D005280 ORTHO05D006253 1.8e-42 176.4 95 82.1
Duzib160G0285 Durio zibethinus HOM05D005280 ORTHO05D006253 3.1e-42 175.6 95 81.1
Prupe.4G062000 Prunus persica HOM05D005280 ORTHO05D006253 1.2e-41 173.7 93 81.7
Sabra11G0048200 Salix brachista HOM05D005280 ORTHO05D006253 1.5e-41 173.3 94 81.9
QL05p047377 Quercus lobata HOM05D005280 ORTHO05D006253 2.0e-41 172.9 93 81.7
SHI28515 Sapria himalayana HOM05D005280 ORTHO05D006253 2.0e-41 172.9 93 83.9
Cpa.g.sc7.74 Carica papaya HOM05D005280 ORTHO05D006253 6.1e-38 161.4 95 80.0
AT1G29260 Arabidopsis thaliana HOM05D005280 ORTHO05D006253 7.9e-38 161.0 95 78.9
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.5e-36 156.0 85 81.2
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.5e-36 156.0 85 81.2
HanXRQChr05g0139841 Helianthus annuus HOM05D005280 ORTHO05D006253 1.3e-35 153.7 83 81.9
FAN16G3700 Fragaria x ananassa HOM05D005280 ORTHO05D006253 6.3e-35 151.4 84 79.8
Haze_06226 Corylus avellana HOM05D005280 ORTHO05D006253 1.4e-34 150.2 93 75.3
Carub.0001s2739 Capsella rubella HOM05D005280 ORTHO05D006253 6.9e-34 147.9 95 73.7
AUR62014277 Chenopodium quinoa HOM05D005280 ORTHO05D006253 2.6e-33 146.0 104 62.5
CBR_g23503 Chara braunii HOM05D005280 ORTHO05D006253 1.7e-32 143.3 91 70.3
SGA_v2.0_scaffold1G00053 Striga asiatica HOM05D005280 ORTHO05D006253 6.5e-32 141.4 95 68.4
SEGI_31924 Sequoiadendron giganteum HOM05D005280 ORTHO05D006253 1.9e-31 139.8 94 66.0
CARHR028510 Cardamine hirsuta HOM05D005280 ORTHO05D006253 1.6e-30 136.7 95 69.5
Lsat_1_v5_gn_7_24160 Lactuca sativa HOM05D005280 ORTHO05D006253 2.1e-30 136.3 93 66.7
Migut.M01035 Erythranthe guttata HOM05D005280 ORTHO05D006253 1.1e-28 130.6 93 66.7
Potri.004G057600 Populus trichocarpa HOM05D005280 ORTHO05D006253 9.7e-28 127.5 93 65.6
AUR62034161 Chenopodium quinoa HOM05D005280 ORTHO05D006253 1.3e-27 127.1 94 59.6
Actinidia39510 Actinidia chinensis HOM05D005280 ORTHO05D006253 2.8e-27 125.9 94 64.9
PRCOL_00004365 Prasinoderma coloniale HOM05D005280 ORTHO05D006253 1.4e-26 123.6 103 56.3
Lj1A206T60 Lonicera japonica HOM05D005280 ORTHO05D006253 9.4e-23 110.9 93 57.0
Thecc.06G170100 Theobroma cacao HOM05D005280 ORTHO05D006253 1.2e-22 110.5 93 57.0
DCAR_007943 Daucus carota HOM05D005280 ORTHO05D006253 8.0e-22 107.8 95 56.8
Gohir.D10G037400 Gossypium hirsutum HOM05D005280 ORTHO05D006253 6.7e-21 104.8 95 53.7
EL10Ac9g22853 Beta vulgaris HOM05D005280 ORTHO05D006253 8.8e-21 104.4 95 55.8
CANSAT80G2107 Cannabis sativa HOM05D005280 ORTHO05D006253 1.5e-20 103.6 93 55.9
AL1G42940 Arabidopsis lyrata HOM05D005280 ORTHO05D006253 3.3e-20 102.4 95 55.8
Gohir.A10G036800 Gossypium hirsutum HOM05D005280 ORTHO05D006253 4.4e-20 102.1 95 52.6
Dinv16775 Davidia involucrata HOM05D005280 ORTHO05D006253 5.7e-20 101.7 57 78.9
Gorai.011G039400 Gossypium raimondii HOM05D005280 ORTHO05D006253 2.2e-19 99.8 92 52.2
Aqoxy1G02046 Aquilegia oxysepala HOM05D019969 ORTHO05D019446 6.3e-19 98.2 88 58.0
Duzib192G0183 Durio zibethinus HOM05D005280 ORTHO05D006253 8.2e-19 97.8 93 51.6
Hma1.2p1_1912F.1_g307330 Hydrangea macrophylla HOM05D019969 ORTHO05D019446 1.1e-18 97.4 92 55.4
MBI16_g15539_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.6e-17 92.8 97 47.4
BolC3t19816H Brassica oleracea HOM05D005280 ORTHO05D006253 1.3e-16 90.5 46 87.0
CSS0022801 Camellia sinensis var. sinensis HOM05D005280 ORTHO05D006253 3.8e-16 89.0 83 55.4
Pp3c15_2410 Physcomitrium patens HOM05D005280 ORTHO05D006253 3.2e-15 85.9 86 53.5
CDE10G0374 Ceratophyllum demersum HOM05D005280 ORTHO05D006253 1.2e-14 84.0 84 50.0
MBI16_g13364_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.2e-14 84.0 106 42.5
MBI16_g15538_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 3.6e-14 82.4 97 42.3
Mapoly0030s0014 Marchantia polymorpha HOM05D005280 ORTHO05D006253 8.0e-14 81.3 48 72.9
MBI16_g04072_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 3.0e-13 79.3 97 46.4
Pp3c17_8040 Physcomitrium patens HOM05D005280 ORTHO05D006253 6.7e-13 78.2 86 47.7
ATR0829G129 Amborella trichopoda HOM05D050206 ORTHO05D038281 1.4e-10 70.5 97 42.3
arahy.Tifrunner.gnm1.ann1.8U8ZZM Arachis hypogaea HOM05D005280 ORTHO05D006253 2.4e-10 69.7 33 93.9
arahy.Tifrunner.gnm1.ann1.IM81E3 Arachis hypogaea HOM05D005280 ORTHO05D006253 2.4e-10 69.7 33 93.9
AagrBONN_evm.TU.Sc2ySwM_117.3414 Anthoceros agrestis HOM05D005280 ORTHO05D006253 7.0e-10 68.2 78 48.7
MBI06_g08594_MAGBIO Magnolia biondii HOM05D038649 ORTHO05D006253 9.1e-10 67.8 105 38.1
arahy.Tifrunner.gnm1.ann1.HIJE33 Arachis hypogaea HOM05D005280 ORTHO05D006253 1.6e-09 67.0 61 52.5
Cfa000612 Carpinus fangiana HOM05D005280 ORTHO05D006253 2.0e-09 66.6 93 38.7
Ca_00439_v3 Cicer arietinum L. HOM05D005280 ORTHO05D006253 2.2e-08 63.2 30 93.3
Glyma.13G229400 Glycine max HOM05D005280 ORTHO05D006253 1.5e-07 60.5 30 86.7
Medtr2g016160 Medicago truncatula HOM05D005280 ORTHO05D006253 1.9e-07 60.1 28 92.9
SMO119G0322 Selaginella moellendorffii HOM05D005280 ORTHO05D006253 1.9e-07 60.1 92 37.0
A09p37140 Brassica napus HOM05D005280 ORTHO05D006253 2.5e-07 59.7 95 36.8
BraA09t39230Z Brassica rapa HOM05D005280 ORTHO05D006253 2.5e-07 59.7 95 36.8
MCO15G120 Micromonas commoda HOM05D005280 ORTHO05D006253 3.2e-07 59.3 44 56.8
Phvul.006G175800 Phaseolus vulgaris HOM05D005280 ORTHO05D006253 4.2e-07 58.9 29 82.8
Dinv40681 Davidia involucrata HOM05D005280 ORTHO05D006253 1.6e-06 57.0 28 89.3
Manes.16G040400 Manihot esculenta HOM05D005280 ORTHO05D006253 2.1e-06 56.6 93 35.5
Aa31LG6G6330 Aethionema arabicum HOM05D005280 ORTHO05D006253 4.7e-06 55.5 27 88.9
BcaC05g26943 Brassica carinata HOM05D005280 ORTHO05D006253 4.7e-06 55.5 28 85.7
C05p27910 Brassica napus HOM05D005280 ORTHO05D006253 4.7e-06 55.5 28 85.7
BolC5t31517H Brassica oleracea HOM05D005280 ORTHO05D006253 4.7e-06 55.5 28 85.7
Ciclev10015974m.g Citrus clementina HOM05D005280 ORTHO05D006253 6.1e-06 55.1 27 88.9
CiPaw.10G059400 Carya illinoinensis HOM05D005280 ORTHO05D006253 8.0e-06 54.7 29 79.3
THA.LOC104804949 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 8.0e-06 54.7 27 85.2


User provided reference genes

Program Settings