Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11590 Trifolium pratense HOM05D007288 ORTHO05D009200 8.9e-81 303.5 151 100.0
Psat5g276680 Pisum sativum HOM05D007288 ORTHO05D009200 5.2e-73 277.7 149 91.3
Lj3g0012395 Lotus japonicus HOM05D007288 ORTHO05D009200 3.5e-69 265.0 150 84.7
Lalb_Chr14g0374871 Lupinus albus HOM05D007288 ORTHO05D009200 9.6e-67 256.9 149 84.6
Ca_01448_v3 Cicer arietinum L. HOM05D007288 ORTHO05D009200 1.6e-66 256.1 148 87.2
Medtr2g093050 Medicago truncatula HOM05D007288 ORTHO05D009200 3.6e-66 255.0 142 88.0
arahy.Tifrunner.gnm1.ann1.A288I1 Arachis hypogaea HOM05D007288 ORTHO05D009200 1.2e-64 250.0 150 81.3
Glyma.15G044300 Glycine max HOM05D007288 ORTHO05D009200 1.5e-64 249.6 142 85.9
arahy.Tifrunner.gnm1.ann1.93BU3Z Arachis hypogaea HOM05D007288 ORTHO05D009200 3.4e-64 248.4 150 80.7
Thecc.09G336000 Theobroma cacao HOM05D007288 ORTHO05D009200 3.4e-56 221.9 146 72.6
Prupe.6G090900 Prunus persica HOM05D007288 ORTHO05D009200 2.9e-55 218.8 147 70.7
Cfa011389 Carpinus fangiana HOM05D007288 ORTHO05D009200 8.4e-55 217.2 146 71.9
Haze_23956 Corylus avellana HOM05D007288 ORTHO05D009200 2.4e-54 215.7 146 70.5
Gorai.001G105400 Gossypium raimondii HOM05D007288 ORTHO05D009200 4.2e-54 214.9 146 69.9
FAN21G3325 Fragaria x ananassa HOM05D007288 ORTHO05D009200 7.1e-54 214.2 147 70.7
Dinv32816 Davidia involucrata HOM05D007288 ORTHO05D009200 2.7e-53 212.2 147 68.7
COL.COLO4_18386 Corchorus olitorius HOM05D007288 ORTHO05D009200 4.6e-53 211.5 139 71.2
FvH4_3g33990 Fragaria vesca HOM05D007288 ORTHO05D009200 1.0e-52 210.3 147 70.1
FAN11G2413 Fragaria x ananassa HOM05D007288 ORTHO05D009200 1.0e-52 210.3 147 70.1
MD11G1120900 Malus domestica HOM05D007288 ORTHO05D009200 1.0e-52 210.3 147 70.1
Atru.chr3.3740 Acer truncatum HOM05D007288 ORTHO05D009200 1.8e-52 209.5 147 69.4
Manes.04G027100 Manihot esculenta HOM05D007288 ORTHO05D009200 1.8e-52 209.5 147 66.0
RcHm_v2.0_Chr5g0061521 Rosa chinensis HOM05D007288 ORTHO05D009200 1.8e-52 209.5 147 68.7
GSVIVG01025099001 Vitis vinifera HOM05D007288 ORTHO05D009200 1.8e-52 209.5 147 68.0
Gohir.A07G093400 Gossypium hirsutum HOM05D007288 ORTHO05D009200 2.3e-52 209.1 146 68.5
Gohir.D07G098000 Gossypium hirsutum HOM05D007288 ORTHO05D009200 3.0e-52 208.8 146 68.5
QL01p035799 Quercus lobata HOM05D007288 ORTHO05D009200 3.0e-52 208.8 146 70.5
Oeu058505.2 Olea europaea HOM05D007288 ORTHO05D009200 3.9e-52 208.4 147 68.7
AT2G28560 Arabidopsis thaliana HOM05D007288 ORTHO05D009200 2.5e-51 205.7 146 68.5
FAN16G0816 Fragaria x ananassa HOM05D007288 ORTHO05D009200 5.6e-51 204.5 146 69.2
Solyc11g072610.3 Solanum lycopersicum HOM05D007288 ORTHO05D009200 7.4e-51 204.1 146 67.1
Sopen11g030260 Solanum pennellii HOM05D007288 ORTHO05D009200 9.6e-51 203.8 142 68.3
Carub.0004s0953 Capsella rubella HOM05D007288 ORTHO05D009200 2.1e-50 202.6 146 67.1
Thhalv10017710m.g Eutrema salsugineum HOM05D007288 ORTHO05D009200 2.1e-50 202.6 146 67.8
CARHR121570 Cardamine hirsuta HOM05D007288 ORTHO05D009200 1.8e-49 199.5 146 66.4
PSO384G1093 Papaver somniferum HOM05D007288 ORTHO05D009200 2.4e-49 199.1 140 70.0
TAR623G1771 Trochodendron aralioides HOM05D007288 ORTHO05D009200 2.4e-49 199.1 139 70.5
BcaB06g28228 Brassica carinata HOM05D007288 ORTHO05D009200 6.9e-49 197.6 147 66.7
CiPaw.13G104600 Carya illinoinensis HOM05D007288 ORTHO05D009200 9.0e-49 197.2 146 64.4
PSO339G6024 Papaver somniferum HOM05D007288 ORTHO05D009200 9.0e-49 197.2 140 69.3
CSS0002437 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 1.5e-48 196.4 146 65.1
Sp4g11390 Schrenkiella parvula HOM05D007288 ORTHO05D009200 1.5e-48 196.4 148 66.9
PGSC0003DMG401025391 Solanum tuberosum HOM05D007288 ORTHO05D009200 1.5e-48 196.4 142 66.9
THA.LOC104800033 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 2.0e-48 196.1 141 67.4
THA.LOC104815758 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 2.0e-48 196.1 141 67.4
Hma1.2p1_0861F.1_g229670 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 4.5e-48 194.9 139 69.8
Hma1.2p1_0861F.1_g229675 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 4.5e-48 194.9 139 69.8
BolC4t27295H Brassica oleracea HOM05D007288 ORTHO05D009200 5.8e-48 194.5 140 70.0
Sc21g0000170 Simmondsia chinensis HOM05D007288 ORTHO05D009200 7.6e-48 194.1 141 65.2
ClCG02G020790 Citrullus lanatus HOM05D007288 ORTHO05D009200 1.0e-47 193.7 140 66.4
Lj2A1042T48 Lonicera japonica HOM05D007288 ORTHO05D009200 1.0e-47 193.7 139 69.1
BcaC02g08159 Brassica carinata HOM05D007288 ORTHO05D009200 1.3e-47 193.4 144 67.4
C04p57770 Brassica napus HOM05D007288 ORTHO05D009200 1.3e-47 193.4 144 67.4
Peaxi162Scf00616g00015 Petunia axillaris HOM05D007288 ORTHO05D009200 1.3e-47 193.4 139 68.3
Sed0021724 Sechium edule HOM05D007288 ORTHO05D009200 1.3e-47 193.4 139 66.9
Actinidia00813 Actinidia chinensis HOM05D007288 ORTHO05D009200 1.7e-47 193.0 146 63.7
MSTRG.12620 Avicennia marina HOM05D007288 ORTHO05D009200 1.7e-47 193.0 147 64.6
BraA04t17729Z Brassica rapa HOM05D007288 ORTHO05D009200 1.7e-47 193.0 141 68.8
CANSAT54G2720 Cannabis sativa HOM05D007288 ORTHO05D009200 1.7e-47 193.0 150 66.7
Cpa.g.sc139.41 Carica papaya HOM05D007288 ORTHO05D009200 1.7e-47 193.0 139 65.5
A04p21650 Brassica napus HOM05D007288 ORTHO05D009200 2.2e-47 192.6 139 69.8
Aqoxy4G03169 Aquilegia oxysepala HOM05D007288 ORTHO05D009200 2.9e-47 192.2 149 65.1
CsaV3_6G021820 Cucumis sativus L. HOM05D007288 ORTHO05D009200 4.9e-47 191.4 147 63.9
Lsat_1_v5_gn_5_164600 Lactuca sativa HOM05D007288 ORTHO05D009200 6.5e-47 191.0 141 67.4
PGR102G2823 Punica granatum HOM05D007288 ORTHO05D009200 1.1e-46 190.3 148 60.8
Nn2g10628 Nelumbo nucifera HOM05D007288 ORTHO05D009200 7.1e-46 187.6 149 61.1
Cc01_g11850 Coffea canephora HOM05D007288 ORTHO05D009200 6.0e-45 184.5 135 71.1
ECA248G2408 Erigeron canadensis HOM05D007288 ORTHO05D009200 6.0e-45 184.5 141 64.5
SGA_v2.0_scaffold146G36239 Striga asiatica HOM05D007288 ORTHO05D009200 6.0e-45 184.5 141 67.4
HanXRQChr15g0493521 Helianthus annuus HOM05D007288 ORTHO05D009200 1.3e-44 183.3 141 63.8
Eucgr.B02451 Eucalyptus grandis HOM05D007288 ORTHO05D009200 5.7e-43 177.9 144 61.1
SalBow3G3212 Salvia bowleyana HOM05D007288 ORTHO05D009200 5.7e-43 177.9 148 60.8
TWI75G0177 Tripterygium wilfordii HOM05D007288 ORTHO05D009200 5.7e-43 177.9 141 63.1
ATR0594G195 Amborella trichopoda HOM05D007288 ORTHO05D009200 1.3e-42 176.8 139 61.2
AUR62025046 Chenopodium quinoa HOM05D007288 ORTHO05D009200 1.6e-42 176.4 150 59.3
Zm00001eb355220 Zea mays HOM05D007288 ORTHO05D009200 2.6e-40 169.1 147 57.1
Nitab4.5_0004512g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 7.6e-40 167.5 134 63.4
Os05g0121700 Oryza sativa ssp. japonica HOM05D007288 ORTHO05D009200 1.0e-39 167.2 149 55.7
MELO3C025727.2 Cucumis melo HOM05D007288 ORTHO05D009200 1.3e-39 166.8 126 64.3
unitig_61.g26166 Utricularia gibba HOM05D007288 ORTHO05D009200 2.9e-39 165.6 143 58.0
CAN.G84.32 Capsicum annuum HOM05D007288 ORTHO05D009200 5.0e-39 164.9 119 68.9
Aqoxy7G02469 Aquilegia oxysepala HOM05D007288 ORTHO05D009200 8.5e-39 164.1 132 62.9
CSS0029402 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 4.2e-38 161.8 116 65.5
CDE04G2273 Ceratophyllum demersum HOM05D007288 ORTHO05D009200 1.0e-36 157.1 143 58.0
Ciclev10028721m.g Citrus clementina HOM05D007288 ORTHO05D009200 5.1e-36 154.8 130 60.8
Hund08177 Selenicereus undatus HOM05D007288 ORTHO05D009200 6.7e-36 154.5 142 54.2
HPP92_001033 Vanilla planifolia HOM05D007288 ORTHO05D009200 6.7e-36 154.5 145 55.9
VMungo1080G1892 Vigna mungo HOM05D007288 ORTHO05D009200 1.9e-35 152.9 94 78.7
Nitab4.5_0014946g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 3.7e-34 148.7 119 63.9
SEGI_21779 Sequoiadendron giganteum HOM05D007288 ORTHO05D009200 4.2e-30 135.2 136 51.5
vmacro14486 Vaccinium macrocarpon HOM05D007288 ORTHO05D009200 2.2e-26 122.9 139 48.2
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 1.7e-23 113.2 149 41.6
Ah.01g002370 Amaranthus hybridus HOM05D007288 ORTHO05D009200 1.6e-21 106.7 96 59.4
AagrBONN_evm.TU.Sc2ySwM_368.1709 Anthoceros agrestis HOM05D007288 ORTHO05D009200 2.2e-18 96.3 115 47.0
Pp3c25_15290 Physcomitrium patens HOM05D007288 ORTHO05D009200 8.2e-18 94.4 120 43.3
CBR_g23396 Chara braunii HOM05D007288 ORTHO05D009200 3.1e-17 92.4 123 40.7
Mapoly0007s0061 Marchantia polymorpha HOM05D007288 ORTHO05D009200 3.5e-16 89.0 123 41.5
Phvul.L000462 Phaseolus vulgaris HOM05D007288 ORTHO05D009200 1.0e-15 87.4 53 79.2
Aqoxy1G03071 Aquilegia oxysepala HOM05D005441 ORTHO05D006879 9.7e-11 70.9 46 69.6
Cre01.g025300 Chlamydomonas reinhardtii HOM05D007288 ORTHO05D009200 6.3e-10 68.2 110 37.3
PRCOL_00002179 Prasinoderma coloniale HOM05D007288 ORTHO05D009200 3.5e-08 62.4 54 50.0


User provided reference genes

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