Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1155 Trifolium pratense HOM05D004264 ORTHO05D004680 9.5e-33 142.9 71 100.0
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 4.1e-28 127.5 71 87.3
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 9.5e-25 116.3 68 80.9
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 3.1e-23 111.3 69 76.8
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 4.0e-23 110.9 70 75.7
Ca_07679_v3 Cicer arietinum L. HOM05D004264 ORTHO05D004680 4.4e-22 107.5 60 85.0
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 4.4e-22 107.5 71 73.2
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 1.7e-21 105.5 70 72.9
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 3.7e-21 104.4 71 69.0
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 6.4e-21 103.6 68 70.6
arahy.Tifrunner.gnm1.ann1.IC5F1T Arachis hypogaea HOM05D004264 ORTHO05D004680 7.0e-20 100.1 69 66.7
arahy.Tifrunner.gnm1.ann1.G0I7HS Arachis hypogaea HOM05D004264 ORTHO05D004680 2.7e-19 98.2 69 65.2
VMungo1215G3396 Vigna mungo HOM05D004264 ORTHO05D004680 1.7e-18 95.5 61 73.8
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 3.0e-18 94.7 61 72.1
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 1.1e-17 92.8 70 57.1
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 1.5e-17 92.4 68 64.7
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 7.3e-17 90.1 69 56.5
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 9.5e-17 89.7 67 58.2
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 9.5e-17 89.7 68 60.3
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 1.6e-16 89.0 69 53.6
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.8e-16 88.2 69 53.6
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.8e-16 88.2 69 53.6
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 2.8e-16 88.2 69 53.6
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 3.6e-16 87.8 69 53.6
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 3.6e-16 87.8 68 60.3
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 4.7e-16 87.4 68 57.4
Haze_21060 Corylus avellana HOM05D004264 ORTHO05D004680 1.4e-15 85.9 65 60.0
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 1.8e-15 85.5 68 55.9
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 2.3e-15 85.1 70 51.4
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 2.3e-15 85.1 68 57.4
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 2.3e-15 85.1 68 55.9
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 2.3e-15 85.1 68 55.9
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 3.1e-15 84.7 69 53.6
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 3.1e-15 84.7 69 53.6
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 4.0e-15 84.3 70 54.3
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 5.2e-15 84.0 67 58.2
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 8.9e-15 83.2 69 52.2
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.2e-14 82.8 68 54.4
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.2e-14 82.8 68 54.4
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.2e-14 82.8 68 54.4
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 1.5e-14 82.4 69 50.7
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 1.5e-14 82.4 70 52.9
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 2.0e-14 82.0 68 54.4
Oeu005191.1 Olea europaea HOM05D004264 ORTHO05D004680 2.6e-14 81.6 60 61.7
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 3.4e-14 81.3 68 52.9
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 3.4e-14 81.3 69 52.2
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 4.4e-14 80.9 66 51.5
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 4.4e-14 80.9 68 52.9
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.4e-14 80.9 68 52.9
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.4e-14 80.9 68 52.9
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 4.4e-14 80.9 65 55.4
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 4.4e-14 80.9 68 51.5
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 5.8e-14 80.5 68 52.9
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 7.5e-14 80.1 68 54.4
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 9.9e-14 79.7 68 51.5
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 1.3e-13 79.3 61 54.1
PGSC0003DMG400031135 Solanum tuberosum HOM05D004264 ORTHO05D004680 1.3e-13 79.3 58 60.3
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 1.7e-13 79.0 67 53.7
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 1.7e-13 79.0 68 51.5
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 2.2e-13 78.6 66 48.5
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 2.2e-13 78.6 66 48.5
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 2.2e-13 78.6 68 52.9
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 2.2e-13 78.6 66 50.0
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 2.9e-13 78.2 66 48.5
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 2.9e-13 78.2 66 48.5
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 3.7e-13 77.8 66 48.5
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 3.7e-13 77.8 66 50.0
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 3.7e-13 77.8 68 52.9
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 3.7e-13 77.8 71 50.7
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 3.7e-13 77.8 65 52.3
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 4.9e-13 77.4 69 47.8
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 6.4e-13 77.0 71 50.7
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 8.3e-13 76.6 66 50.0
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 8.3e-13 76.6 68 51.5
HanXRQChr13g0390251 Helianthus annuus HOM05D004264 ORTHO05D004680 2.4e-12 75.1 62 54.8
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 2.4e-12 75.1 71 50.7
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 2.4e-12 75.1 63 52.4
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 3.2e-12 74.7 68 47.1
HanXRQChr02g0036821 Helianthus annuus HOM05D004264 ORTHO05D004680 3.2e-12 74.7 60 53.3
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 3.2e-12 74.7 67 47.8
Potri.012G107200 Populus trichocarpa HOM05D004264 ORTHO05D004680 4.1e-12 74.3 56 55.4
DCAR_018675 Daucus carota HOM05D004264 ORTHO05D004680 5.4e-12 73.9 59 61.0
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 5.4e-12 73.9 70 45.7
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 1.6e-11 72.4 57 59.6
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 1.3e-10 69.3 65 44.6
Aqoxy3G03064 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 1.7e-10 68.9 70 42.9
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 1.7e-10 68.9 69 43.5
Migut.J00116 Erythranthe guttata HOM05D004264 ORTHO05D004680 6.6e-10 67.0 58 56.9
SEGI_36861 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 8.6e-10 66.6 70 40.0
Oeu041877.1 Olea europaea HOM05D004264 ORTHO05D004680 1.1e-09 66.2 51 60.8
Oeu041878.1 Olea europaea HOM05D004264 ORTHO05D004680 1.1e-09 66.2 51 60.8
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 1.5e-09 65.9 51 58.8
SEGI_24150 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 1.9e-09 65.5 70 40.0
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.5e-09 65.1 68 44.1
Os04g0445400 Oryza sativa ssp. japonica HOM05D004264 ORTHO05D004680 3.3e-09 64.7 63 46.0
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 1.2e-08 62.8 67 43.3


User provided reference genes

Program Settings