Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11468 Trifolium pratense HOM05D037880 ORTHO05D030192 4.9e-61 237.7 122 100.0
TPR.G881 Trifolium pratense HOM05D037880 ORTHO05D030192 1.3e-37 159.8 96 87.5
TPR.G22550 Trifolium pratense HOM05D037880 ORTHO05D030192 3.4e-14 82.0 109 49.5
VMungo1215G0840 Vigna mungo HOM05D000824 ORTHO05D002221 1.7e-13 79.7 106 46.2
Lalb_Chr16g0380751 Lupinus albus HOM05D000824 ORTHO05D002221 2.9e-13 79.0 110 45.5
Ca_25103_v3 Cicer arietinum L. HOM05D000824 ORTHO05D002221 4.9e-13 78.2 108 44.4
Lj2g0019271 Lotus japonicus HOM05D000824 ORTHO05D002221 8.4e-13 77.4 108 40.7
CsaV3_3G001070 Cucumis sativus L. HOM05D000824 ORTHO05D002221 1.1e-12 77.0 110 40.9
MELO3C013797.2 Cucumis melo HOM05D000824 ORTHO05D002221 1.4e-12 76.6 110 40.9
Phvul.002G128800 Phaseolus vulgaris HOM05D000824 ORTHO05D002221 1.4e-12 76.6 106 43.4
Glyma.09G213500 Glycine max HOM05D000824 ORTHO05D002221 2.4e-12 75.9 108 41.7
CiPaw.11G103100 Carya illinoinensis HOM05D000824 ORTHO05D002221 3.2e-12 75.5 107 41.1
Haze_08068 Corylus avellana HOM05D000824 ORTHO05D002221 1.6e-11 73.2 109 41.3
Cfa012589 Carpinus fangiana HOM05D000824 ORTHO05D002221 2.1e-11 72.8 109 41.3
Sed0000920 Sechium edule HOM05D000824 ORTHO05D002221 2.7e-11 72.4 111 38.7
ClCG10G001050 Citrullus lanatus HOM05D000824 ORTHO05D002221 3.5e-11 72.0 110 39.1
TAR375G1100 Trochodendron aralioides HOM05D000824 ORTHO05D002221 4.6e-11 71.6 108 38.0
GSVIVG01022784001 Vitis vinifera HOM05D000824 ORTHO05D002221 4.6e-11 71.6 108 41.7
PSO063G1428 Papaver somniferum HOM05D000824 ORTHO05D002221 7.9e-11 70.9 108 39.8
PSO782G4142 Papaver somniferum HOM05D000824 ORTHO05D002221 1.8e-10 69.7 108 38.9
Glyma.09G213300 Glycine max HOM05D000824 ORTHO05D010437 6.7e-10 67.8 110 41.8
Aqoxy7G02240 Aquilegia oxysepala HOM05D000824 ORTHO05D002221 8.7e-10 67.4 109 36.7
MD06G1015200 Malus domestica HOM05D000824 ORTHO05D002221 8.7e-10 67.4 113 35.4
RcHm_v2.0_Chr7g0207931 Rosa chinensis HOM05D000824 ORTHO05D010437 8.7e-10 67.4 108 41.7
TPR.G17277 Trifolium pratense HOM05D000824 ORTHO05D002221 8.7e-10 67.4 108 40.7
CDE01G0675 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 1.1e-09 67.0 106 38.7
Hma1.2p1_0544F.1_g175470 Hydrangea macrophylla HOM05D000824 ORTHO05D002221 1.1e-09 67.0 108 35.2
SEGI_17936 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.1e-09 67.0 106 38.7
Lj8C334G12 Lonicera japonica HOM05D000824 ORTHO05D002221 1.5e-09 66.6 110 40.9
Dinv22867 Davidia involucrata HOM05D000824 ORTHO05D002221 2.5e-09 65.9 108 37.0
arahy.Tifrunner.gnm1.ann1.04BWFM Arachis hypogaea HOM05D000824 ORTHO05D002221 4.3e-09 65.1 107 34.6
arahy.Tifrunner.gnm1.ann1.RQXR03 Arachis hypogaea HOM05D000824 ORTHO05D002221 4.3e-09 65.1 107 34.6
MSTRG.25728 Avicennia marina HOM05D000824 ORTHO05D002221 4.3e-09 65.1 107 37.4
Prupe.5G020900 Prunus persica HOM05D000824 ORTHO05D002221 5.6e-09 64.7 113 35.4
Psat2g142080 Pisum sativum HOM05D000824 ORTHO05D002221 7.4e-09 64.3 110 41.8
Ciclev10000254m.g Citrus clementina HOM05D000824 ORTHO05D002221 1.3e-08 63.5 112 38.4
Dinv28015 Davidia involucrata HOM05D000824 ORTHO05D002221 1.6e-08 63.2 111 38.7
RcHm_v2.0_Chr7g0213381 Rosa chinensis HOM05D000824 ORTHO05D002221 1.6e-08 63.2 109 35.8
Sc01g0007020 Simmondsia chinensis HOM05D000824 ORTHO05D002221 2.8e-08 62.4 110 38.2
FvH4_5g23941 Fragaria vesca HOM05D000824 ORTHO05D002221 3.7e-08 62.0 109 34.9
FAN18G3561 Fragaria x ananassa HOM05D000824 ORTHO05D002221 3.7e-08 62.0 109 34.9
FAN18G2954 Fragaria x ananassa HOM05D000824 ORTHO05D002221 4.8e-08 61.6 109 34.9
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 6.2e-08 61.2 108 38.9
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 6.2e-08 61.2 108 38.9
vmacro00064 Vaccinium macrocarpon HOM05D000824 ORTHO05D002221 6.2e-08 61.2 111 37.8
FAN04G2448 Fragaria x ananassa HOM05D000824 ORTHO05D002221 8.1e-08 60.8 109 34.9
FAN13G0731 Fragaria x ananassa HOM05D000824 ORTHO05D002221 8.1e-08 60.8 109 34.9
HanXRQChr17g0539191 Helianthus annuus HOM05D000824 ORTHO05D002221 8.1e-08 60.8 111 36.0
CSS0033943 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D002221 1.1e-07 60.5 109 39.4
Rhsim11G0025400 Rhododendron simsii HOM05D000824 ORTHO05D002221 1.1e-07 60.5 108 34.3
FAN08G2719 Fragaria x ananassa HOM05D000824 ORTHO05D002221 1.4e-07 60.1 109 34.9
HPP92_012596 Vanilla planifolia HOM05D000824 ORTHO05D002221 1.8e-07 59.7 109 33.0
QL12p000754 Quercus lobata HOM05D000824 ORTHO05D002221 2.4e-07 59.3 114 32.5
QL12p000778 Quercus lobata HOM05D000824 ORTHO05D002221 2.4e-07 59.3 115 33.9
PGR031G2041 Punica granatum HOM05D000824 ORTHO05D002221 5.3e-07 58.2 108 35.2
Migut.A00558 Erythranthe guttata HOM05D000824 ORTHO05D002221 6.9e-07 57.8 107 30.8
Oeu042211.1 Olea europaea HOM05D000824 ORTHO05D002221 1.2e-06 57.0 111 34.2
Eucgr.D02593 Eucalyptus grandis HOM05D000824 ORTHO05D002221 2.0e-06 56.2 123 30.1
Medtr5g026880 Medicago truncatula HOM05D000824 ORTHO05D030192 2.0e-06 56.2 108 38.0
HanXRQChr03g0081181 Helianthus annuus HOM05D000824 ORTHO05D002221 3.4e-06 55.5 114 33.3
EL10Ac5g11968 Beta vulgaris HOM05D000824 ORTHO05D002221 4.5e-06 55.1 109 34.9
AUR62018601 Chenopodium quinoa HOM05D000824 ORTHO05D002221 5.8e-06 54.7 109 34.9
HPP92_014304 Vanilla planifolia HOM05D000824 ORTHO05D002221 7.6e-06 54.3 109 29.4
Medtr5g048670 Medicago truncatula HOM05D000824 ORTHO05D259839 1.0e-05 53.9 107 34.6


User provided reference genes

Program Settings