Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11411 Trifolium pratense HOM05D002211 ORTHO05D002206 7.0e-29 129.8 60 100.0
Medtr7g052620 Medicago truncatula HOM05D002211 ORTHO05D002206 1.0e-19 99.4 70 70.0
Psat3g151120 Pisum sativum HOM05D002211 ORTHO05D002206 4.4e-15 84.0 68 66.2
Glyma.18G152300 Glycine max HOM05D002211 ORTHO05D002206 1.9e-13 78.6 71 56.3
Lalb_Chr07g0194521 Lupinus albus HOM05D002211 ORTHO05D002206 1.9e-13 78.6 69 56.5
Glyma.08G344400 Glycine max HOM05D002211 ORTHO05D002206 4.1e-13 77.4 70 55.7
Phvul.008G137200 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 5.4e-13 77.0 69 56.5
Phvul.010G031300 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 9.2e-13 76.3 69 52.2
Psat4g206640 Pisum sativum HOM05D002211 ORTHO05D002206 9.2e-13 76.3 65 56.9
Glyma.13G008000 Glycine max HOM05D002211 ORTHO05D002206 1.6e-12 75.5 69 52.2
VMungo0331G1849 Vigna mungo HOM05D002211 ORTHO05D002206 1.6e-12 75.5 69 52.2
VMungo1383G1511 Vigna mungo HOM05D002211 ORTHO05D002206 1.6e-12 75.5 70 55.7
arahy.Tifrunner.gnm1.ann1.0TX68Y Arachis hypogaea HOM05D002211 ORTHO05D002206 2.1e-12 75.1 68 55.9
arahy.Tifrunner.gnm1.ann1.PCV855 Arachis hypogaea HOM05D002211 ORTHO05D002206 2.1e-12 75.1 68 55.9
Lj1g0027803 Lotus japonicus HOM05D002211 ORTHO05D002206 3.5e-12 74.3 63 61.9
Glyma.03G089800 Glycine max HOM05D002211 ORTHO05D002206 6.0e-12 73.6 69 50.7
Lalb_Chr03g0041111 Lupinus albus HOM05D002211 ORTHO05D002206 5.1e-11 70.5 65 56.9
Lalb_Chr01g0022001 Lupinus albus HOM05D002211 ORTHO05D002206 8.6e-11 69.7 70 52.9
Gohir.A11G142300 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-10 69.3 67 49.3
Gohir.D11G148600 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-10 69.3 67 49.3
Gorai.007G159300 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.1e-10 69.3 67 49.3
Lj3g0001912 Lotus japonicus HOM05D002211 ORTHO05D002206 1.9e-10 68.6 66 50.0
Haze_23452 Corylus avellana HOM05D002211 ORTHO05D002206 4.3e-10 67.4 65 52.3
FvH4_2g17840 Fragaria vesca HOM05D002211 ORTHO05D002206 5.6e-10 67.0 42 66.7
FAN24G0249 Fragaria x ananassa HOM05D002211 ORTHO05D002206 5.6e-10 67.0 42 66.7
RcHm_v2.0_Chr6g0282871 Rosa chinensis HOM05D002211 ORTHO05D002206 1.6e-09 65.5 66 50.0
Cpa.g.sc8.75 Carica papaya HOM05D002211 ORTHO05D002206 2.1e-09 65.1 40 65.0
MD05G1159900 Malus domestica HOM05D002211 ORTHO05D002206 2.1e-09 65.1 67 49.3
Medtr8g011470 Medicago truncatula HOM05D002211 ORTHO05D002206 2.1e-09 65.1 69 49.3
Prupe.8G190600 Prunus persica HOM05D002211 ORTHO05D002206 2.1e-09 65.1 68 48.5
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 2.8e-09 64.7 63 52.4
MD10G1152300 Malus domestica HOM05D002211 ORTHO05D002206 3.6e-09 64.3 67 50.7
Gorai.N003500 Gossypium raimondii HOM05D002211 ORTHO05D002206 4.7e-09 63.9 42 64.3
CANSAT01G1044 Cannabis sativa HOM05D002211 ORTHO05D002206 6.2e-09 63.5 69 50.7
COL.COLO4_38590 Corchorus olitorius HOM05D002211 ORTHO05D002206 6.2e-09 63.5 64 50.0
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 6.2e-09 63.5 64 48.4
Ciclev10017076m.g Citrus clementina HOM05D002211 ORTHO05D002206 1.8e-08 62.0 68 47.1
CiPaw.13G055000 Carya illinoinensis HOM05D002211 ORTHO05D002206 2.3e-08 61.6 68 50.0
Potri.002G250800 Populus trichocarpa HOM05D002211 ORTHO05D002206 4.0e-08 60.8 66 42.4
Manes.13G054300 Manihot esculenta HOM05D002211 ORTHO05D002206 6.8e-08 60.1 74 39.2
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 1.2e-07 59.3 39 61.5
Gohir.A07G159400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.5e-07 58.9 67 49.3
CsaV3_7G026890 Cucumis sativus L. HOM05D002211 ORTHO05D002206 2.6e-07 58.2 62 41.9
Gohir.D07G167000 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.6e-07 58.2 42 64.3
QL09p046170 Quercus lobata HOM05D002211 ORTHO05D002206 2.6e-07 58.2 64 50.0
ClCG09G008150 Citrullus lanatus HOM05D002211 ORTHO05D002206 4.4e-07 57.4 65 38.5
Eucgr.H00728 Eucalyptus grandis HOM05D002211 ORTHO05D002206 7.6e-07 56.6 65 41.5
TPR.G18976 Trifolium pratense HOM05D002211 ORTHO05D002206 1.7e-06 55.5 42 59.5
Gohir.D07G203200 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.2e-06 55.1 68 39.7
Gorai.001G228600 Gossypium raimondii HOM05D002211 ORTHO05D002206 2.9e-06 54.7 68 39.7
Nn5g27522 Nelumbo nucifera HOM05D002211 ORTHO05D002206 3.7e-06 54.3 39 56.4
Gohir.A07G196800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 4.9e-06 53.9 69 39.1
CSS0050270 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 6.4e-06 53.5 69 44.9
Eucgr.K02089 Eucalyptus grandis HOM05D002211 ORTHO05D002206 6.4e-06 53.5 62 40.3
CiPaw.14G043400 Carya illinoinensis HOM05D002211 ORTHO05D002206 8.4e-06 53.1 64 43.8


User provided reference genes

Program Settings