Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11377 Trifolium pratense HOM05D009500 ORTHO05D000368 6.7e-142 507.3 247 100.0
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 2.1e-95 352.8 252 73.0
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 3.7e-84 315.5 260 63.1
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 1.1e-80 303.9 253 63.2
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 3.2e-75 285.8 251 61.0
TPR.G4714 Trifolium pratense HOM05D009500 ORTHO05D000368 1.9e-72 276.6 223 68.2
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 2.0e-69 266.5 261 57.9
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 2.0e-69 266.5 251 56.6
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 6.4e-68 261.5 262 56.9
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 2.7e-66 256.1 260 53.5
Medtr1g111630 Medicago truncatula HOM05D009500 ORTHO05D000368 8.6e-65 251.1 254 53.1
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 1.2e-63 247.3 260 54.2
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 3.6e-63 245.7 251 52.6
Psat3g004120 Pisum sativum HOM05D009500 ORTHO05D000368 4.3e-56 222.2 218 55.5
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 3.0e-49 199.5 222 51.4
TPR.G36952 Trifolium pratense HOM05D009500 ORTHO05D000368 7.9e-34 148.3 102 61.8
Medtr7g117735 Medicago truncatula HOM05D009500 ORTHO05D000368 1.3e-33 147.5 90 71.1
TPR.G18155 Trifolium pratense HOM05D009500 ORTHO05D000368 1.3e-31 141.0 97 64.9
Psat3g003680 Pisum sativum HOM05D009500 ORTHO05D000368 5.8e-29 132.1 179 47.5
Medtr7g116260 Medicago truncatula HOM05D009500 ORTHO05D000368 1.3e-28 131.0 111 58.6
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 4.5e-21 105.9 154 47.4
TPR.G6989 Trifolium pratense HOM05D009500 ORTHO05D000368 3.2e-19 99.8 96 60.4
TPR.G7278 Trifolium pratense HOM05D009500 ORTHO05D000368 4.3e-16 89.4 46 84.8
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 8.2e-15 85.1 260 26.9
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 2.6e-13 80.1 215 28.4
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.0e-12 78.2 250 29.2
Ca_25084_v3 Cicer arietinum L. HOM05D009500 ORTHO05D010403 1.0e-12 78.2 104 48.1
Ca_09527_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 8.4e-12 75.1 87 49.4
FAN23G0158 Fragaria x ananassa HOM05D029661 ORTHO05D029371 3.2e-11 73.2 168 31.5
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 4.2e-11 72.8 206 30.6
Ca_26228_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 5.5e-11 72.4 182 32.4
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 9.3e-11 71.6 159 30.8
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.0e-09 66.6 177 30.5
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 6.7e-09 65.5 147 31.3
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 6.7e-09 65.5 210 26.7
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.5e-08 63.5 159 30.8
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 5.7e-08 62.4 149 30.2
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 9.7e-08 61.6 145 30.3
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 1.3e-07 61.2 209 26.8
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-07 60.8 152 32.2
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 3.7e-07 59.7 206 27.2
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.7e-07 59.7 184 29.3
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.8e-07 59.3 231 24.7
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.8e-07 59.3 123 32.5
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.8e-07 59.3 230 27.0
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 6.3e-07 58.9 202 27.2
Psat3g047200 Pisum sativum HOM05D008175 ORTHO05D010403 8.2e-07 58.5 236 28.0
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.2e-07 58.5 173 26.0
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.4e-06 57.8 210 29.5
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.4e-06 57.8 124 33.1
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.4e-06 57.8 216 27.3
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.1e-06 56.6 175 28.6
ClCG06G017710 Citrullus lanatus HOM05D000576 ORTHO05D000368 5.3e-06 55.8 169 27.2
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 6.9e-06 55.5 236 22.0
CAN.G884.5 Capsicum annuum HOM05D013549 ORTHO05D000368 6.9e-06 55.5 147 28.6
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.0e-06 55.1 210 28.6
RcHm_v2.0_Chr3g0480841 Rosa chinensis HOM05D000576 ORTHO05D000368 9.0e-06 55.1 174 28.2
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 9.0e-06 55.1 110 29.1


User provided reference genes

Program Settings