Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 6.4e-96 354.0 169 100.0
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 4.6e-86 321.2 169 89.9
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 2.3e-85 318.9 169 89.9
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 6.1e-78 294.3 169 81.7
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 5.7e-76 287.7 169 79.9
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 1.9e-71 272.7 170 77.1
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 7.2e-71 270.8 169 77.5
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 7.2e-71 270.8 169 77.5
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 1.4e-63 246.5 152 77.6
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.9e-63 246.1 163 73.6
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 2.5e-63 245.7 169 70.4
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 4.2e-63 245.0 155 74.2
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 5.5e-63 244.6 169 73.4
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.2e-62 243.4 152 74.3
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.2e-62 243.4 163 72.4
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 2.1e-62 242.7 169 66.9
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.7e-62 242.3 168 70.2
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 3.6e-62 241.9 169 70.4
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 6.1e-62 241.1 161 70.8
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 8.0e-62 240.7 159 71.7
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.0e-61 240.4 167 69.5
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 1.0e-61 240.4 154 74.0
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 1.8e-61 239.6 154 73.4
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 3.0e-61 238.8 160 70.6
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 3.0e-61 238.8 159 73.0
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 5.2e-61 238.0 152 73.7
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 5.2e-61 238.0 159 73.0
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 5.2e-61 238.0 159 73.0
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.1e-60 236.9 152 70.4
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 1.1e-60 236.9 163 71.2
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 2.6e-60 235.7 169 68.6
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.6e-60 235.7 164 72.0
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 3.3e-60 235.3 164 71.3
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 7.4e-60 234.2 160 66.9
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 7.4e-60 234.2 163 71.8
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 7.4e-60 234.2 165 70.3
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 7.4e-60 234.2 165 70.3
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 9.7e-60 233.8 152 74.3
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 2.2e-59 232.6 153 72.5
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 2.8e-59 232.3 152 74.3
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 2.4e-58 229.2 152 71.1
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 2.4e-58 229.2 166 68.1
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 2.4e-58 229.2 152 73.7
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 3.1e-58 228.8 152 72.4
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 4.1e-58 228.4 155 69.0
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 5.3e-58 228.0 162 66.7
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.6e-57 226.5 152 72.4
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.0e-57 226.1 159 67.3
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 2.6e-57 225.7 152 68.4
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 1.0e-56 223.8 152 70.4
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.0e-56 223.8 163 66.9
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 1.7e-56 223.0 209 55.0
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 3.8e-56 221.9 165 65.5
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 5.0e-56 221.5 152 69.1
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 5.0e-56 221.5 152 69.7
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 5.0e-56 221.5 152 69.1
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.5e-56 221.1 159 66.0
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 1.9e-55 219.5 152 69.7
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 2.5e-55 219.2 159 66.0
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 5.5e-55 218.0 150 68.0
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 5.5e-55 218.0 233 50.2
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 7.2e-55 217.6 152 71.1
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 9.4e-55 217.2 152 68.4
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.6e-54 216.5 159 64.2
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.6e-54 216.5 152 71.1
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 3.6e-54 215.3 154 64.9
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 8.0e-54 214.2 168 66.1
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 1.0e-53 213.8 151 66.2
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 4.0e-53 211.8 162 63.0
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 5.2e-53 211.5 153 66.0
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 5.2e-53 211.5 152 69.1
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 8.8e-53 210.7 152 70.4
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.2e-52 210.3 152 69.1
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 2.0e-52 209.5 152 67.8
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.6e-52 209.1 152 67.8
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 2.6e-52 209.1 152 67.8
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 4.4e-52 208.4 152 67.1
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 7.5e-52 207.6 133 75.9
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 9.7e-52 207.2 165 60.6
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.3e-51 206.8 110 90.0
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.7e-51 206.5 148 68.9
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 2.2e-51 206.1 152 67.1
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.7e-51 205.3 185 58.9
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 8.3e-51 204.1 133 71.4
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.1e-50 203.8 154 67.5
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 5.3e-50 201.4 156 64.1
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 3.5e-49 198.7 163 59.5
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 5.5e-47 191.4 113 77.9
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 9.4e-47 190.7 151 62.3
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 1.6e-46 189.9 112 77.7
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.1e-46 189.5 151 58.9
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 4.7e-46 188.3 120 70.0
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.1e-42 175.6 159 56.0
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 8.6e-40 167.5 113 66.4
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 2.8e-38 162.5 111 69.4
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.7e-38 161.8 108 72.2
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 2.6e-36 156.0 88 79.5
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 2.2e-35 152.9 91 75.8
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 5.0e-32 141.7 152 53.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.3e-24 117.1 75 73.3
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 5.2e-21 105.1 107 57.9
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 8.9e-21 104.4 153 39.2
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 4.1e-18 95.5 63 71.4
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 8.6e-16 87.8 79 50.6
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.1e-13 80.9 53 71.7
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.3e-08 63.9 81 49.4


User provided reference genes

Program Settings