Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 5.2e-90 334.3 165 100.0
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 5.8e-57 224.6 129 88.4
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.6e-54 216.5 129 83.7
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 1.0e-53 213.8 128 82.8
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 5.6e-52 208.0 129 79.8
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 2.8e-51 205.7 129 79.8
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 1.1e-50 203.8 129 76.0
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 1.4e-50 203.4 128 75.8
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 1.8e-50 203.0 161 69.6
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.2e-50 201.4 129 76.7
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 2.6e-49 199.1 126 76.2
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 2.6e-49 199.1 129 73.6
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 3.4e-49 198.7 129 73.6
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 3.4e-49 198.7 129 73.6
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 5.8e-49 198.0 125 77.6
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 4.9e-48 194.9 129 72.1
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 4.9e-48 194.9 125 76.8
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 8.3e-48 194.1 129 73.6
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 1.1e-47 193.7 129 69.0
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 3.2e-47 192.2 129 72.9
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 3.2e-47 192.2 132 72.7
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.2e-47 192.2 133 71.4
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 3.2e-47 192.2 128 74.2
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 4.1e-47 191.8 129 70.5
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 7.1e-47 191.0 129 70.5
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 7.1e-47 191.0 129 72.1
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 9.2e-47 190.7 129 69.8
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 9.2e-47 190.7 143 67.8
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.2e-46 190.3 129 70.5
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.6e-46 189.9 124 73.4
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.6e-46 189.9 124 73.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.1e-46 189.5 129 70.5
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.1e-46 189.5 129 70.5
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.1e-46 189.5 129 73.6
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 2.7e-46 189.1 129 74.4
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 2.7e-46 189.1 126 71.4
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 2.7e-46 189.1 126 71.4
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.7e-46 189.1 129 73.6
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 2.7e-46 189.1 129 70.5
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 3.5e-46 188.7 127 70.1
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 4.6e-46 188.3 126 70.6
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 4.6e-46 188.3 129 70.5
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 7.8e-46 187.6 129 69.0
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 1.0e-45 187.2 129 70.5
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 1.0e-45 187.2 124 72.6
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 1.0e-45 187.2 129 70.5
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 1.3e-45 186.8 129 74.4
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.7e-45 186.4 129 69.0
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 2.3e-45 186.0 129 70.5
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 3.0e-45 185.7 129 69.8
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 3.0e-45 185.7 129 69.8
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.0e-45 185.7 125 72.0
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 3.9e-45 185.3 126 69.8
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 3.9e-45 185.3 126 69.8
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 3.9e-45 185.3 126 69.8
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 6.6e-45 184.5 124 71.8
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 6.6e-45 184.5 126 70.6
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 6.6e-45 184.5 126 70.6
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.5e-44 183.3 128 70.3
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 2.5e-44 182.6 135 67.4
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 4.3e-44 181.8 129 68.2
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 4.3e-44 181.8 122 72.1
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 5.6e-44 181.4 129 68.2
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 5.6e-44 181.4 159 63.5
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-43 180.3 129 68.2
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.2e-43 180.3 129 68.2
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.2e-43 180.3 129 70.5
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.6e-43 179.9 129 68.2
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 1.6e-43 179.9 129 67.4
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.6e-43 179.9 129 66.7
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.6e-43 179.9 126 67.5
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.6e-43 179.9 125 71.2
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 1.6e-43 179.9 125 71.2
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 2.1e-43 179.5 124 67.7
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.1e-43 179.5 124 67.7
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 2.8e-43 179.1 135 68.9
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 3.6e-43 178.7 126 66.7
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 4.7e-43 178.3 128 69.5
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 6.2e-43 177.9 129 64.3
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 6.2e-43 177.9 129 67.4
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 1.1e-42 177.2 125 69.6
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.4e-42 176.8 126 65.1
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 1.4e-42 176.8 129 65.9
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.8e-42 176.4 126 66.7
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 3.1e-42 175.6 130 68.5
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 3.1e-42 175.6 122 70.5
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 4.0e-42 175.3 122 68.9
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 6.8e-42 174.5 129 65.1
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.2e-41 173.7 129 66.7
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-41 172.2 133 63.9
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 4.4e-41 171.8 126 67.5
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 7.6e-41 171.0 129 64.3
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 9.9e-41 170.6 124 67.7
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 9.9e-41 170.6 126 65.1
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.7e-40 169.9 115 71.3
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 2.9e-40 169.1 137 61.3
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 4.9e-40 168.3 126 67.5
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 4.9e-40 168.3 126 63.5
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 6.4e-40 167.9 139 61.9
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 8.4e-40 167.5 139 61.9
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.1e-39 165.2 109 70.6
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 3.3e-36 155.6 115 66.1
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.4e-31 140.2 136 58.1
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 5.4e-31 138.3 125 56.0
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 2.7e-30 136.0 121 57.0
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 4.6e-30 135.2 91 64.8
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 7.8e-30 134.4 87 77.0
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 1.6e-27 126.7 69 84.1
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 3.6e-27 125.6 123 53.7
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 6.2e-27 124.8 127 55.1
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 1.1e-26 124.0 81 77.8
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-26 123.6 123 50.4
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-26 123.6 123 54.5
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 1.8e-26 123.2 81 66.7
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 9.0e-26 120.9 121 53.7
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 1.5e-25 120.2 132 51.5
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 2.6e-25 119.4 126 50.0
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-25 118.6 127 50.4
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 7.6e-25 117.9 120 48.3
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 7.6e-25 117.9 122 53.3
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.8e-24 115.5 122 50.0
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.8e-24 115.5 127 48.0
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.1e-23 114.0 122 48.4
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.4e-23 112.8 122 50.0
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 3.2e-23 112.5 119 46.2
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-22 110.5 122 50.0
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.7e-22 109.4 135 46.7
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.7e-22 109.4 79 67.1
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 4.6e-22 108.6 81 71.6
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-21 107.5 101 50.5
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-21 107.5 122 46.7
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-21 107.1 122 48.4
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 3.9e-21 105.5 122 47.5
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-20 103.6 122 48.4
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-20 102.8 124 46.8
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-20 102.8 120 48.3
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-19 100.5 122 47.5
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-19 99.8 119 47.1
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 4.8e-19 98.6 119 45.4
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 9.3e-15 84.3 72 52.8
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 8.7e-13 77.8 65 61.5
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.5e-09 67.0 98 42.9
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 2.6e-09 66.2 96 39.6
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 2.2e-08 63.2 105 37.1
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.5e-07 59.7 66 53.0
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.2e-07 58.9 99 39.4
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.5e-06 55.8 121 32.2


User provided reference genes

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