Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.8e-69 265.8 134 100.0
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 1.8e-61 239.2 125 95.2
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 2.4e-61 238.8 125 95.2
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 3.1e-61 238.4 123 96.7
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 5.3e-61 237.7 123 95.1
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 5.3e-61 237.7 123 95.1
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 5.3e-61 237.7 125 95.2
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 9.1e-61 236.9 123 95.1
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.2e-60 236.5 123 94.3
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.6e-60 236.1 123 94.3
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 2.0e-60 235.7 123 94.3
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 2.0e-60 235.7 125 93.6
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.5e-60 234.6 123 92.7
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 4.5e-60 234.6 123 92.7
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 4.5e-60 234.6 123 94.3
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 5.9e-60 234.2 123 93.5
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 7.7e-60 233.8 123 94.3
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 7.7e-60 233.8 123 94.3
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 7.7e-60 233.8 123 93.5
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.3e-59 233.0 123 92.7
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.7e-59 232.6 123 92.7
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 2.2e-59 232.3 123 92.7
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 2.2e-59 232.3 123 91.9
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 2.2e-59 232.3 123 91.9
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 2.9e-59 231.9 123 93.5
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 3.8e-59 231.5 123 91.9
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 3.8e-59 231.5 123 91.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.8e-59 231.5 123 91.9
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 5.0e-59 231.1 123 90.2
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 6.5e-59 230.7 123 91.9
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 8.5e-59 230.3 123 92.7
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 8.5e-59 230.3 123 92.7
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 1.1e-58 229.9 123 91.9
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.5e-58 229.6 123 90.2
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.9e-58 229.2 123 91.1
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.9e-58 229.2 123 91.1
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.9e-58 229.2 123 91.1
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 2.5e-58 228.8 123 90.2
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 3.2e-58 228.4 123 91.9
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 3.2e-58 228.4 123 89.4
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 4.2e-58 228.0 123 91.1
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 7.2e-58 227.3 123 92.7
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 7.2e-58 227.3 123 89.4
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 9.4e-58 226.9 123 90.2
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 9.4e-58 226.9 123 90.2
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.2e-57 226.5 123 88.6
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 1.6e-57 226.1 122 91.8
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 2.1e-57 225.7 123 90.2
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 3.6e-57 224.9 123 90.2
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 4.7e-57 224.6 123 89.4
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 6.1e-57 224.2 123 89.4
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 8.0e-57 223.8 123 88.6
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.0e-56 223.4 123 88.6
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.0e-56 223.4 123 88.6
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 1.4e-56 223.0 123 87.8
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.4e-56 223.0 123 87.8
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 1.4e-56 223.0 123 87.8
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 1.4e-56 223.0 123 87.8
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.4e-56 223.0 123 87.8
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 1.4e-56 223.0 123 87.8
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 3.0e-56 221.9 123 86.2
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 4.0e-56 221.5 123 87.8
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 4.0e-56 221.5 123 87.0
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 5.2e-56 221.1 123 87.0
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.2e-56 221.1 143 80.4
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 5.2e-56 221.1 123 87.0
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 2.0e-55 219.2 123 87.0
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.0e-55 219.2 123 84.6
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 3.1e-53 211.8 123 82.9
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 4.1e-53 211.5 133 78.9
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 5.4e-53 211.1 127 84.3
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 6.5e-51 204.1 123 78.0
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 6.5e-51 204.1 125 80.8
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.6e-49 199.5 125 79.2
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 3.6e-49 198.4 123 82.1
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 6.1e-49 197.6 108 88.0
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.2e-47 193.4 123 81.3
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.0e-47 192.6 123 79.7
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.6e-47 192.2 101 89.1
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 5.7e-47 191.0 123 78.9
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 4.9e-46 188.0 101 90.1
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 1.8e-45 186.0 123 74.0
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.0e-44 182.6 123 74.8
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 2.7e-44 182.2 124 72.6
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 2.9e-43 178.7 123 69.1
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 5.0e-43 177.9 101 86.1
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 3.3e-42 175.3 94 88.3
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 9.5e-42 173.7 90 93.3
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.3e-40 169.1 123 72.4
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.9e-34 149.4 125 60.8
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 1.9e-34 149.4 127 63.8
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 5.6e-34 147.9 94 79.8
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.1e-29 133.7 75 84.0
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 9.2e-29 130.6 65 93.8
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.0e-28 129.4 65 95.4
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 6.0e-28 127.9 69 85.5
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 2.5e-26 122.5 75 80.0
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 8.1e-25 117.5 65 84.6
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.6e-20 103.2 58 87.9
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.8e-17 92.4 44 97.7


User provided reference genes

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