Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11230 Trifolium pratense HOM05D000500 ORTHO05D000367 6.1e-34 147.1 86 100.0
TPR.G7488 Trifolium pratense HOM05D000500 ORTHO05D000367 6.3e-15 84.0 47 97.9
Medtr3g018740 Medicago truncatula HOM05D000500 ORTHO05D000367 1.6e-13 79.3 50 84.0
Medtr2g046030 Medicago truncatula HOM05D000500 ORTHO05D000367 1.0e-12 76.6 50 78.0
Medtr2g045980 Medicago truncatula HOM05D000500 ORTHO05D000367 5.0e-12 74.3 49 79.6
Medtr3g015620 Medicago truncatula HOM05D000500 ORTHO05D000367 1.5e-11 72.8 46 80.4
TPR.G11220 Trifolium pratense HOM05D000500 ORTHO05D000367 1.9e-11 72.4 50 76.0
Medtr3g101010 Medicago truncatula HOM05D000500 ORTHO05D000367 3.3e-11 71.6 50 76.0
Medtr3g100990 Medicago truncatula HOM05D000096 ORTHO05D000045 4.2e-11 71.2 46 76.1
Medtr4g088535 Medicago truncatula HOM05D000500 ORTHO05D000367 7.2e-11 70.5 47 76.6
TPR.G11225 Trifolium pratense HOM05D000500 ORTHO05D000367 6.1e-10 67.4 43 81.4
Medtr8g027420 Medicago truncatula HOM05D000500 ORTHO05D000367 1.0e-09 66.6 48 70.8
Medtr3g048000 Medicago truncatula HOM05D000500 ORTHO05D000367 1.8e-09 65.9 47 72.3
Medtr8g027395 Medicago truncatula HOM05D000500 ORTHO05D000367 1.8e-09 65.9 83 49.4
TPR.G17953 Trifolium pratense HOM05D000500 ORTHO05D000367 2.3e-09 65.5 84 53.6
TPR.G26059 Trifolium pratense HOM05D000500 ORTHO05D000367 3.0e-09 65.1 48 75.0
Ca_06561_v3 Cicer arietinum L. HOM05D000500 ORTHO05D000367 4.0e-09 64.7 50 70.0
Psat0s178g0280 Pisum sativum HOM05D000500 ORTHO05D000367 4.0e-09 64.7 51 68.6
TPR.G26061 Trifolium pratense HOM05D000500 ORTHO05D000367 5.2e-09 64.3 87 48.3
Medtr4g045707 Medicago truncatula HOM05D000500 ORTHO05D000367 6.8e-09 63.9 47 68.1
Peaxi162Scf00357g00833 Petunia axillaris HOM05D000500 ORTHO05D000367 8.9e-09 63.5 52 67.3
TPR.G26036 Trifolium pratense HOM05D000500 ORTHO05D000367 8.9e-09 63.5 52 69.2
Medtr8g461160 Medicago truncatula HOM05D000500 ORTHO05D000367 1.5e-08 62.8 49 69.4
Lj1g0012781 Lotus japonicus HOM05D000500 ORTHO05D000367 2.6e-08 62.0 60 60.0
Medtr3g101180 Medicago truncatula HOM05D000500 ORTHO05D000367 4.4e-08 61.2 85 50.6
Psat5g046600 Pisum sativum HOM05D000500 ORTHO05D000367 4.4e-08 61.2 52 69.2
PSO541G5539 Papaver somniferum HOM05D000500 ORTHO05D000367 7.5e-08 60.5 64 53.1
PSO675G3551 Papaver somniferum HOM05D000500 ORTHO05D000367 7.5e-08 60.5 64 53.1
Dinv39349 Davidia involucrata HOM05D000500 ORTHO05D000367 9.8e-08 60.1 51 64.7
TAR628G0412 Trochodendron aralioides HOM05D000500 ORTHO05D000367 9.8e-08 60.1 51 64.7
Peaxi162Scf00126g01615 Petunia axillaris HOM05D000500 ORTHO05D000367 1.7e-07 59.3 52 65.4
TPR.G16453 Trifolium pratense HOM05D000500 ORTHO05D000367 1.7e-07 59.3 60 56.7
Nitab4.5_0000068g0270 Nicotiana tabacum HOM05D000500 ORTHO05D000367 2.2e-07 58.9 52 65.4
CiPaw.16G050600 Carya illinoinensis HOM05D000500 ORTHO05D000367 3.7e-07 58.2 52 65.4
Haze_17581 Corylus avellana HOM05D000500 ORTHO05D000367 3.7e-07 58.2 52 63.5
Nn5g29356 Nelumbo nucifera HOM05D000500 ORTHO05D000367 3.7e-07 58.2 51 64.7
QL02p006253 Quercus lobata HOM05D000500 ORTHO05D000367 3.7e-07 58.2 52 61.5
QL05p089308 Quercus lobata HOM05D004857 ORTHO05D005663 3.7e-07 58.2 52 61.5
vmacro04470 Vaccinium macrocarpon HOM05D000500 ORTHO05D000367 3.7e-07 58.2 51 66.7
Aqoxy6G00896 Aquilegia oxysepala HOM05D000500 ORTHO05D000367 6.3e-07 57.4 51 62.7
HanXRQChr13g0416951 Helianthus annuus HOM05D000500 ORTHO05D000367 6.3e-07 57.4 46 63.0
Lj1g0021990 Lotus japonicus HOM05D000500 ORTHO05D000367 6.3e-07 57.4 59 61.0
Solyc04g079440.3 Solanum lycopersicum HOM05D000500 ORTHO05D000367 6.3e-07 57.4 53 64.2
Solyc04g079480.2 Solanum lycopersicum HOM05D000500 ORTHO05D000367 6.3e-07 57.4 52 61.5
Sopen04g033050 Solanum pennellii HOM05D000500 ORTHO05D000367 6.3e-07 57.4 53 64.2
PGSC0003DMG400008034 Solanum tuberosum HOM05D000500 ORTHO05D000367 6.3e-07 57.4 52 65.4
HanXRQChr13g0416931 Helianthus annuus HOM05D000500 ORTHO05D000367 8.3e-07 57.0 50 60.0
Medtr3g111150 Medicago truncatula HOM05D000500 ORTHO05D000367 8.3e-07 57.0 38 71.1
Nitab4.5_0008935g0030 Nicotiana tabacum HOM05D000500 ORTHO05D000367 8.3e-07 57.0 52 59.6
CAN.G371.68 Capsicum annuum HOM05D000500 ORTHO05D000367 1.1e-06 56.6 54 59.3
Cfa018496 Carpinus fangiana HOM05D000500 ORTHO05D000367 1.1e-06 56.6 52 61.5
CiPaw.16G050400 Carya illinoinensis HOM05D000500 ORTHO05D000367 1.1e-06 56.6 52 65.4
HanXRQChr05g0151121 Helianthus annuus HOM05D000500 ORTHO05D000367 1.1e-06 56.6 48 58.3
Ca_15976_v3 Cicer arietinum L. HOM05D000500 ORTHO05D000367 1.4e-06 56.2 50 60.0
MD06G1030400 Malus domestica HOM05D000500 ORTHO05D000367 1.4e-06 56.2 51 62.7
Peaxi162Scf01092g00009 Petunia axillaris HOM05D000500 ORTHO05D000367 1.4e-06 56.2 59 54.2
Phvul.009G062300 Phaseolus vulgaris HOM05D000500 ORTHO05D000367 1.4e-06 56.2 51 64.7
arahy.Tifrunner.gnm1.ann1.HEQU6V Arachis hypogaea HOM05D000500 ORTHO05D000367 1.8e-06 55.8 51 62.7
ECA246G4278 Erigeron canadensis HOM05D000500 ORTHO05D000367 1.8e-06 55.8 49 57.1
Glyma.06G036300 Glycine max HOM05D000500 ORTHO05D000367 1.8e-06 55.8 51 62.7
Medtr3g101050 Medicago truncatula HOM05D000500 ORTHO05D000367 1.8e-06 55.8 45 68.9
PGSC0003DMG400011694 Solanum tuberosum HOM05D000500 ORTHO05D000367 1.8e-06 55.8 52 59.6
VMungo0338G0001 Vigna mungo HOM05D000500 ORTHO05D000367 1.8e-06 55.8 51 64.7
CAN.G371.71 Capsicum annuum HOM05D000500 ORTHO05D000367 2.4e-06 55.5 52 59.6
Lj1g0009094 Lotus japonicus HOM05D000500 ORTHO05D000367 2.4e-06 55.5 59 59.3
Lalb_Chr23g0266861 Lupinus albus HOM05D000500 ORTHO05D000367 2.4e-06 55.5 51 60.8
PGSC0003DMG400011685 Solanum tuberosum HOM05D000500 ORTHO05D000367 2.4e-06 55.5 52 59.6
Dinv36004 Davidia involucrata HOM05D000500 ORTHO05D000367 3.1e-06 55.1 51 62.7
Hma1.2p1_0260F.1_g104600 Hydrangea macrophylla HOM05D000500 ORTHO05D000367 3.1e-06 55.1 51 62.7
Lj1g0024317 Lotus japonicus HOM05D000500 ORTHO05D000367 3.1e-06 55.1 50 66.0
Nitab4.5_0000068g0210 Nicotiana tabacum HOM05D000500 ORTHO05D000367 3.1e-06 55.1 52 57.7
Sabra14G0025800 Salix brachista HOM05D000500 ORTHO05D000367 3.1e-06 55.1 51 60.8
Sc21g0005590 Simmondsia chinensis HOM05D000500 ORTHO05D000367 3.1e-06 55.1 80 51.2
Lsat_1_v5_gn_6_114100 Lactuca sativa HOM05D000500 ORTHO05D000367 4.1e-06 54.7 59 52.5
Lj1g0005978 Lotus japonicus HOM05D000500 ORTHO05D000367 4.1e-06 54.7 58 51.7
Lj1g0020300 Lotus japonicus HOM05D000500 ORTHO05D000367 4.1e-06 54.7 45 66.7
Lj1g0025629 Lotus japonicus HOM05D000500 ORTHO05D000367 4.1e-06 54.7 54 55.6
Lalb_Chr01g0011921 Lupinus albus HOM05D000500 ORTHO05D000367 4.1e-06 54.7 52 59.6
Oeu036543.1 Olea europaea HOM05D000500 ORTHO05D000367 4.1e-06 54.7 51 62.7
Oeu036544.1 Olea europaea HOM05D000500 ORTHO05D000367 4.1e-06 54.7 51 62.7
Oeu036545.1 Olea europaea HOM05D000500 ORTHO05D000367 4.1e-06 54.7 51 62.7
TWI36G0077 Tripterygium wilfordii HOM05D000500 ORTHO05D000367 4.1e-06 54.7 53 58.5
HanXRQChr05g0151101 Helianthus annuus HOM05D000500 ORTHO05D000367 5.4e-06 54.3 48 56.2
HanXRQChr05g0151111 Helianthus annuus HOM05D000500 ORTHO05D000367 5.4e-06 54.3 48 56.2
MBI16_g24702_MAGBIO Magnolia biondii HOM05D000500 ORTHO05D000367 5.4e-06 54.3 51 60.8
Medtr4g093550 Medicago truncatula HOM05D000500 ORTHO05D000367 5.4e-06 54.3 49 61.2
Oeu029846.1 Olea europaea HOM05D000500 ORTHO05D000367 5.4e-06 54.3 59 55.9
TPR.G26066 Trifolium pratense HOM05D000500 ORTHO05D000367 5.4e-06 54.3 47 61.7
Atru.chr13.606 Acer truncatum HOM05D000500 ORTHO05D000367 7.0e-06 53.9 51 60.8
CAN.G371.73 Capsicum annuum HOM05D000500 ORTHO05D000367 7.0e-06 53.9 50 60.0
Lsat_1_v5_gn_6_114120 Lactuca sativa HOM05D000500 ORTHO05D000367 7.0e-06 53.9 51 58.8
Lj1g0021409 Lotus japonicus HOM05D000500 ORTHO05D000367 7.0e-06 53.9 53 56.6
Medtr3g101030 Medicago truncatula HOM05D000500 ORTHO05D000367 7.0e-06 53.9 46 65.2
Oeu011550.1 Olea europaea HOM05D000500 ORTHO05D000367 7.0e-06 53.9 50 62.0
FvH4_5g01890 Fragaria vesca HOM05D000500 ORTHO05D000367 9.2e-06 53.5 53 56.6
FAN13G1142 Fragaria x ananassa HOM05D000500 ORTHO05D000367 9.2e-06 53.5 53 56.6
FAN18G3980 Fragaria x ananassa HOM05D000500 ORTHO05D002227 9.2e-06 53.5 53 56.6
HanXRQChr13g0417011 Helianthus annuus HOM05D000500 ORTHO05D000367 9.2e-06 53.5 51 58.8
HanXRQChr13g0417021 Helianthus annuus HOM05D000500 ORTHO05D000367 9.2e-06 53.5 51 58.8
Lj2g0023954 Lotus japonicus HOM05D000500 ORTHO05D000367 9.2e-06 53.5 45 66.7


User provided reference genes

Program Settings