Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11219 Trifolium pratense HOM05D009845 ORTHO05D010624 2.0e-62 242.3 123 100.0
TPR.G6905 Trifolium pratense HOM05D009845 ORTHO05D010624 1.5e-41 172.9 94 95.7
Medtr3g078610 Medicago truncatula HOM05D009845 ORTHO05D010624 4.3e-41 171.4 94 92.6
Psat5g113560 Pisum sativum HOM05D009845 ORTHO05D010624 6.2e-40 167.5 94 90.4
Ca_16215_v3 Cicer arietinum L. HOM05D009845 ORTHO05D010624 1.4e-39 166.4 94 92.6
arahy.Tifrunner.gnm1.ann1.3S39J7 Arachis hypogaea HOM05D009845 ORTHO05D010624 5.1e-34 147.9 94 78.7
arahy.Tifrunner.gnm1.ann1.L3Y80W Arachis hypogaea HOM05D009845 ORTHO05D010624 5.1e-34 147.9 94 78.7
arahy.Tifrunner.gnm1.ann1.XL5EFA Arachis hypogaea HOM05D009845 ORTHO05D010624 5.1e-34 147.9 94 78.7
arahy.Tifrunner.gnm1.ann1.XS77WZ Arachis hypogaea HOM05D009845 ORTHO05D010624 5.1e-34 147.9 94 78.7
arahy.Tifrunner.gnm1.ann1.W8CL8V Arachis hypogaea HOM05D009845 ORTHO05D010624 4.3e-33 144.8 94 77.7
Lj1g0026374 Lotus japonicus HOM05D009845 ORTHO05D010624 1.1e-31 140.2 93 77.4
Phvul.009G182700 Phaseolus vulgaris HOM05D009845 ORTHO05D010624 1.1e-31 140.2 94 77.7
Glyma.04G178000 Glycine max HOM05D009845 ORTHO05D010624 5.3e-31 137.9 94 78.7
Lalb_Chr08g0236141 Lupinus albus HOM05D009845 ORTHO05D010624 9.0e-31 137.1 85 82.4
Glyma.04G178200 Glycine max HOM05D009845 ORTHO05D010624 1.2e-30 136.7 94 77.7
Lalb_Chr23g0273071 Lupinus albus HOM05D009845 ORTHO05D010624 1.5e-30 136.3 94 78.7
VMungo1309G2800 Vigna mungo HOM05D009845 ORTHO05D010624 2.5e-28 129.0 93 72.0
CANSAT16G0049 Cannabis sativa HOM05D009845 ORTHO05D010624 2.5e-20 102.4 116 53.4
Potri.004G049600 Populus trichocarpa HOM05D009845 ORTHO05D010624 7.2e-20 100.9 96 57.3
MSTRG.25414 Avicennia marina HOM05D009845 ORTHO05D010624 4.6e-19 98.2 103 53.4
SHI44549 Sapria himalayana HOM05D005794 ORTHO05D006814 4.6e-19 98.2 93 58.1
Sabra04G0031300 Salix brachista HOM05D009845 ORTHO05D010624 1.4e-18 96.7 103 51.5
Oeu033677.1 Olea europaea HOM05D009845 ORTHO05D010624 8.8e-18 94.0 103 51.5
SHI48376 Sapria himalayana HOM05D005794 ORTHO05D006814 8.8e-18 94.0 93 54.8
SHI37163 Sapria himalayana HOM05D005794 ORTHO05D006814 1.1e-17 93.6 93 53.8
Lalb_Chr00c24g0406721 Lupinus albus HOM05D005794 ORTHO05D006814 1.9e-17 92.8 92 53.3
SHI35300 Sapria himalayana HOM05D005794 ORTHO05D006814 7.4e-17 90.9 92 53.3
SHI50742 Sapria himalayana HOM05D005794 ORTHO05D006814 7.4e-17 90.9 93 52.7
Nitab4.5_0000687g0270 Nicotiana tabacum HOM05D009845 ORTHO05D010624 4.8e-16 88.2 103 47.6
EL10Ac1g02199 Beta vulgaris HOM05D005794 ORTHO05D006814 1.7e-13 79.7 72 55.6
Lsat_1_v5_gn_1_129701 Lactuca sativa HOM05D009845 ORTHO05D010624 6.1e-11 71.2 53 64.2
HanXRQChr16g0506281 Helianthus annuus HOM05D029082 ORTHO05D010624 7.9e-11 70.9 46 69.6
SHI15111 Sapria himalayana HOM05D005794 ORTHO05D006814 7.9e-11 70.9 54 61.1
ECA248G2152 Erigeron canadensis HOM05D029082 ORTHO05D010624 1.0e-10 70.5 46 69.6
HanXRQChr01g0004171 Helianthus annuus HOM05D029082 ORTHO05D010624 1.0e-10 70.5 46 67.4
SHI48878 Sapria himalayana HOM05D005794 ORTHO05D006814 1.0e-10 70.5 70 52.9
Nitab4.5_0004100g0090 Nicotiana tabacum HOM05D009808 ORTHO05D006814 1.1e-09 67.0 54 59.3
TWI39G0104 Tripterygium wilfordii HOM05D011069 ORTHO05D010624 5.7e-09 64.7 47 61.7
Nitab4.5_0002326g0060 Nicotiana tabacum HOM05D005794 ORTHO05D006814 9.7e-09 63.9 63 52.4
SHI20512 Sapria himalayana HOM05D009845 ORTHO05D010624 1.3e-08 63.5 63 50.8
Nitab4.5_0004553g0100 Nicotiana tabacum HOM05D005794 ORTHO05D006814 3.7e-08 62.0 54 53.7
RcHm_v2.0_Chr6g0257981 Rosa chinensis HOM05D022571 ORTHO05D010624 8.2e-08 60.8 71 47.9
Nn2g15526 Nelumbo nucifera HOM05D009845 ORTHO05D006814 2.4e-07 59.3 65 50.8
HPP92_004941 Vanilla planifolia HOM05D023446 ORTHO05D025972 3.1e-07 58.9 96 42.7
Thhalv10001774m.g Eutrema salsugineum HOM05D011069 ORTHO05D010624 1.2e-06 57.0 60 53.3
Ah.01g013130 Amaranthus hybridus HOM05D007797 ORTHO05D009741 2.0e-06 56.2 45 53.3
BcaNung05601 Brassica carinata HOM05D011069 ORTHO05D010624 2.6e-06 55.8 60 53.3
BcaC01g05061 Brassica carinata HOM05D011069 ORTHO05D010624 3.4e-06 55.5 68 50.0
C03p30640 Brassica napus HOM05D011069 ORTHO05D010624 3.4e-06 55.5 68 50.0
BolC3t15414H Brassica oleracea HOM05D011069 ORTHO05D010624 3.4e-06 55.5 68 50.0
Nitab4.5_0003945g0050 Nicotiana tabacum HOM05D018533 ORTHO05D006814 3.4e-06 55.5 44 56.8
BcaB01g03211 Brassica carinata HOM05D011069 ORTHO05D010624 4.5e-06 55.1 47 57.4
BraA05t19128Z Brassica rapa HOM05D011069 ORTHO05D010624 5.9e-06 54.7 47 57.4
Carub.0004s2920 Capsella rubella HOM05D011069 ORTHO05D010624 5.9e-06 54.7 60 53.3
Sp4g28540 Schrenkiella parvula HOM05D011069 ORTHO05D010624 5.9e-06 54.7 60 51.7
A05p01300 Brassica napus HOM05D011069 ORTHO05D010624 7.7e-06 54.3 68 48.5


User provided reference genes

Program Settings