Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.3e-261 906.0 496 100.0
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 3.0e-186 655.6 451 78.7
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.4e-183 646.7 446 77.8
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 2.2e-176 622.9 458 70.5
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 4.9e-176 621.7 459 70.4
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.4e-175 620.2 459 70.2
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.4e-170 603.6 444 70.3
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.4e-170 603.6 461 67.0
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.3e-168 597.0 444 71.6
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.1e-163 579.7 452 71.0
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 6.8e-162 574.7 455 64.6
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 2.9e-160 569.3 456 62.3
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 3.7e-160 568.9 473 62.8
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 8.3e-160 567.8 450 64.9
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 4.6e-158 562.0 460 62.6
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.0e-157 560.8 445 69.0
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 3.0e-157 559.3 445 69.4
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.6e-157 557.8 449 62.4
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.5e-156 557.0 445 63.4
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.5e-156 557.0 446 63.0
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.9e-156 556.6 455 61.8
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.5e-156 556.2 447 63.3
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.5e-156 556.2 448 62.3
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 7.3e-156 554.7 450 62.2
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 2.1e-155 553.1 459 61.7
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 4.7e-155 552.0 450 62.4
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 6.2e-155 551.6 460 61.7
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 8.1e-155 551.2 448 61.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.8e-154 550.1 456 61.8
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 3.1e-154 549.3 453 61.6
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 2.0e-153 546.6 456 62.9
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 2.0e-153 546.6 322 80.7
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 3.4e-153 545.8 479 60.3
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 7.6e-153 544.7 448 61.4
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.3e-152 543.9 456 62.7
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 4.9e-152 542.0 447 61.5
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.2e-150 537.3 447 61.3
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.1e-150 536.6 451 61.9
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.3e-149 533.1 448 60.9
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 1.9e-148 530.0 455 61.1
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.3e-148 529.3 456 61.4
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 2.1e-147 526.6 456 58.8
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 4.7e-147 525.4 456 61.4
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.8e-146 523.5 456 60.7
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 3.1e-146 522.7 466 60.9
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 5.2e-146 521.9 454 59.5
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 6.9e-146 521.5 452 66.6
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 6.9e-146 521.5 445 64.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.5e-145 520.4 459 60.6
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 9.9e-145 517.7 449 68.6
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 2.2e-144 516.5 442 63.8
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 6.4e-144 515.0 452 61.7
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 8.4e-144 514.6 454 63.2
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.1e-143 514.2 426 62.4
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.4e-143 513.8 444 59.2
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 3.2e-143 512.7 449 63.5
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 3.2e-143 512.7 453 61.8
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 6.0e-142 508.4 326 73.9
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 7.8e-142 508.1 307 77.9
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.7e-141 506.9 447 62.2
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 6.6e-141 505.0 452 60.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.1e-140 504.2 463 58.5
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 5.6e-140 501.9 455 60.2
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.1e-139 500.0 452 59.1
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 3.6e-139 499.2 368 72.6
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 4.8e-139 498.8 453 57.6
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 3.1e-138 496.1 448 64.3
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.5e-137 493.8 448 58.0
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 2.6e-137 493.0 452 58.0
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.6e-137 493.0 446 63.9
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 7.6e-137 491.5 464 56.5
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-135 487.3 450 58.2
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 3.2e-135 486.1 468 54.9
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.2e-135 486.1 301 76.7
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 3.2e-135 486.1 479 58.9
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 7.1e-135 485.0 299 76.9
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 9.3e-135 484.6 462 54.8
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 3.5e-134 482.6 461 58.1
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.3e-133 480.7 456 55.9
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 6.7e-133 478.4 479 57.0
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.1e-132 477.6 478 57.5
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.5e-132 477.2 447 55.5
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 3.6e-131 472.6 445 55.3
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 2.0e-129 466.8 454 54.6
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 1.4e-127 460.7 452 55.5
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.6e-123 447.2 515 48.3
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 6.2e-123 445.3 419 58.0
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.6e-121 439.9 302 67.2
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 1.0e-117 427.9 295 69.8
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.9e-116 423.7 272 73.2
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.3e-109 401.0 326 57.4
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.3e-109 401.0 326 57.4
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 3.0e-109 399.8 313 61.0
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 9.7e-108 394.8 448 47.8
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.8e-104 382.9 318 57.2
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 6.5e-104 382.1 403 52.9
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.1e-103 381.3 304 61.2
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.7e-101 372.1 230 77.0
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 6.3e-99 365.5 266 64.7
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.5e-97 360.9 367 54.8
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.6e-97 360.1 220 77.3
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.5e-97 359.4 344 55.5
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.9e-96 356.7 381 56.2
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 5.5e-95 352.4 347 58.5
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.7e-94 350.1 302 57.3
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.0e-80 305.1 203 71.9
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 7.2e-71 272.3 267 48.3
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.3e-67 261.5 276 44.9
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 3.7e-67 260.0 203 60.6
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 3.7e-67 260.0 203 60.6
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 1.8e-66 257.7 168 72.0
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 7.3e-55 219.2 120 84.2
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 5.4e-50 203.0 121 81.0
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 2.0e-44 184.5 274 41.6
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 4.4e-44 183.3 190 48.9
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 1.4e-37 161.8 129 58.1
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.2e-35 154.5 124 58.1
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 1.8e-29 134.8 77 75.3
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.9e-24 117.1 70 78.6
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.1e-21 109.0 67 71.6
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 9.0e-21 105.9 75 65.3
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 3.1e-13 80.9 51 74.5
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 9.0e-13 79.3 118 32.2
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 9.9e-12 75.9 62 51.6
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.0e-08 65.9 59 49.2
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 1.9e-07 61.6 86 48.8
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 1.9e-07 61.6 41 65.9


User provided reference genes

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