Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11161 Trifolium pratense HOM05D000395 ORTHO05D000088 1.1e-116 423.3 206 100.0
TPR.G11166 Trifolium pratense HOM05D000395 ORTHO05D000088 9.0e-100 367.1 205 88.8
TPR.G35741 Trifolium pratense HOM05D000395 ORTHO05D000088 7.4e-62 241.1 202 62.4
Medtr4g119990 Medicago truncatula HOM05D000395 ORTHO05D000088 6.1e-56 221.5 198 60.6
TPR.G11171 Trifolium pratense HOM05D000395 ORTHO05D000088 3.2e-49 199.1 141 69.5
Medtr6g043890 Medicago truncatula HOM05D000395 ORTHO05D000088 2.9e-42 176.0 172 54.7
Psat2g077080 Pisum sativum HOM05D000395 ORTHO05D000088 1.0e-34 151.0 123 57.7
Psat6g025720 Pisum sativum HOM05D000395 ORTHO05D000088 1.1e-33 147.5 126 56.3
Lalb_Chr16g0383161 Lupinus albus HOM05D000395 ORTHO05D000088 4.1e-28 129.0 200 42.5
Lj2g0006143 Lotus japonicus HOM05D000395 ORTHO05D000088 7.0e-28 128.3 140 50.7
Lalb_Chr10g0095131 Lupinus albus HOM05D000395 ORTHO05D000088 1.7e-21 107.1 178 41.6
Lj1g0021368 Lotus japonicus HOM05D000395 ORTHO05D000088 8.3e-21 104.8 175 40.6
Glyma.07G157300 Glycine max HOM05D000395 ORTHO05D000088 1.8e-20 103.6 149 43.0
Phvul.003G007500 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 3.2e-20 102.8 137 43.8
Phvul.003G007400 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 1.2e-19 100.9 131 43.5
arahy.Tifrunner.gnm1.ann1.NX8WJH Arachis hypogaea HOM05D000395 ORTHO05D000088 5.2e-15 85.5 130 43.1
arahy.Tifrunner.gnm1.ann1.47X239 Arachis hypogaea HOM05D000395 ORTHO05D000088 8.9e-15 84.7 97 48.5
VMungo0720G2046 Vigna mungo HOM05D000395 ORTHO05D000088 2.2e-13 80.1 204 30.4
Glyma.10G281300 Glycine max HOM05D000395 ORTHO05D000088 3.7e-13 79.3 115 39.1
VMungo1215G0226 Vigna mungo HOM05D000395 ORTHO05D000088 4.9e-13 79.0 189 35.4
RcHm_v2.0_Chr2g0152181 Rosa chinensis HOM05D000395 ORTHO05D000088 1.4e-12 77.4 110 38.2
VMungo0720G0733 Vigna mungo HOM05D000212 ORTHO05D005509 2.7e-11 73.2 204 28.9
Prupe.7G044800 Prunus persica HOM05D000395 ORTHO05D000088 7.8e-11 71.6 92 39.1
Phvul.007G019500 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 1.7e-10 70.5 118 33.1
RcHm_v2.0_Chr2g0103521 Rosa chinensis HOM05D000395 ORTHO05D000088 1.7e-10 70.5 117 35.0
TWI73G1024 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 1.7e-10 70.5 120 34.2
FAN19G3035 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.3e-10 70.1 117 33.3
FvH4_6g38700 Fragaria vesca HOM05D000395 ORTHO05D000088 3.9e-10 69.3 114 39.5
FAN14G4811 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.9e-10 69.3 114 39.5
Lj3g0028048 Lotus japonicus HOM05D000395 ORTHO05D000088 3.9e-10 69.3 84 38.1
Medtr1g035440 Medicago truncatula HOM05D000395 ORTHO05D000088 5.0e-10 68.9 108 43.5
FvH4_1g14670 Fragaria vesca HOM05D000395 ORTHO05D000088 6.6e-10 68.6 116 32.8
FvH4_6g38690 Fragaria vesca HOM05D000395 ORTHO05D000088 8.6e-10 68.2 186 30.1
TPR.G38419 Trifolium pratense HOM05D000395 ORTHO05D000088 8.6e-10 68.2 116 31.0
Prupe.7G044500 Prunus persica HOM05D000395 ORTHO05D000088 1.1e-09 67.8 103 35.9
COL.COLO4_34408 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.5e-09 67.4 138 34.8
CANSAT78G1395 Cannabis sativa HOM05D000395 ORTHO05D000088 3.3e-09 66.2 109 33.9
Glyma.20G108000 Glycine max HOM05D000395 ORTHO05D000088 3.3e-09 66.2 103 38.8
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.3e-09 65.9 119 34.5
Prupe.7G144000 Prunus persica HOM05D000395 ORTHO05D000088 4.3e-09 65.9 90 41.1
TPR.G35646 Trifolium pratense HOM05D000395 ORTHO05D000088 4.3e-09 65.9 117 29.1
CANSAT01G0582 Cannabis sativa HOM05D000395 ORTHO05D000088 5.6e-09 65.5 115 33.0
CANSAT01G0803 Cannabis sativa HOM05D000395 ORTHO05D000088 1.2e-08 64.3 109 33.9
CANSAT01G2731 Cannabis sativa HOM05D000395 ORTHO05D000088 1.2e-08 64.3 122 35.2
CANSAT78G0477 Cannabis sativa HOM05D000395 ORTHO05D000088 1.2e-08 64.3 125 32.0
FvH4_7g04060 Fragaria vesca HOM05D000395 ORTHO05D000088 1.6e-08 63.9 159 29.6
FAN03G1401 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.6e-08 63.9 172 29.7
Gohir.A11G188800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.6e-08 63.9 118 30.5
CANSAT01G1395 Cannabis sativa HOM05D000395 ORTHO05D000088 2.1e-08 63.5 186 29.6
CANSAT01G2954 Cannabis sativa HOM05D000395 ORTHO05D000088 2.8e-08 63.2 124 29.0
FAN06G4820 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.8e-08 63.2 159 29.6
FvH4_7g02010 Fragaria vesca HOM05D000395 ORTHO05D000088 3.6e-08 62.8 103 39.8
FAN06G4020 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.6e-08 62.8 103 39.8
TPR.G11177 Trifolium pratense HOM05D000395 ORTHO05D000088 3.6e-08 62.8 111 31.5
CANSAT01G2326 Cannabis sativa HOM05D000395 ORTHO05D000088 4.7e-08 62.4 127 30.7
MD02G1159700 Malus domestica HOM05D000395 ORTHO05D000088 4.7e-08 62.4 103 35.0
FAN28G0564 Fragaria x ananassa HOM05D000395 ORTHO05D000088 6.2e-08 62.0 104 36.5
Medtr1g035460 Medicago truncatula HOM05D000395 ORTHO05D000088 8.1e-08 61.6 194 28.4
CANSAT01G1099 Cannabis sativa HOM05D000395 ORTHO05D000088 1.1e-07 61.2 114 34.2
CANSAT01G2152 Cannabis sativa HOM05D000395 ORTHO05D000088 1.1e-07 61.2 127 30.7
FAN19G3192 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.1e-07 61.2 182 30.2
Gohir.A10G093700 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.1e-07 61.2 121 32.2
Gorai.011G103800 Gossypium raimondii HOM05D000395 ORTHO05D000088 1.4e-07 60.8 121 32.2
PSO339G0204 Papaver somniferum HOM05D000395 ORTHO05D000088 1.4e-07 60.8 109 33.0
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 1.8e-07 60.5 118 31.4
CANSAT01G3184 Cannabis sativa HOM05D000395 ORTHO05D000088 2.3e-07 60.1 116 34.5
Eucgr.H01965 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.3e-07 60.1 113 31.9
FvH4_1g29250 Fragaria vesca HOM05D000395 ORTHO05D000088 3.1e-07 59.7 170 29.4
FAN28G2202 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-07 59.7 178 30.9
Lalb_Chr10g0095141 Lupinus albus HOM05D000395 ORTHO05D000088 3.1e-07 59.7 118 32.2
Eucgr.G00888 Eucalyptus grandis HOM05D000395 ORTHO05D000088 6.8e-07 58.5 105 34.3
FAN16G1797 Fragaria x ananassa HOM05D000395 ORTHO05D000088 6.8e-07 58.5 108 36.1
Gohir.D10G094400 Gossypium hirsutum HOM05D000395 ORTHO05D000088 6.8e-07 58.5 121 31.4
Lj6g0021528 Lotus japonicus HOM05D000395 ORTHO05D000088 6.8e-07 58.5 132 35.6
Eucgr.G01245 Eucalyptus grandis HOM05D000395 ORTHO05D000088 8.9e-07 58.2 110 29.1
Gohir.A02G160850 Gossypium hirsutum HOM05D000395 ORTHO05D000088 8.9e-07 58.2 101 37.6
Eucgr.D00268 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.5e-06 57.4 108 33.3
FAN04G0695 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.5e-06 57.4 102 35.3
FAN13G0933 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.5e-06 57.4 102 36.3
Sabra01G0175400 Salix brachista HOM05D000395 ORTHO05D000088 1.5e-06 57.4 89 29.2
FAN23G2287 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.0e-06 57.0 103 37.9
Gohir.A02G160900 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.6e-06 56.6 98 37.8
Prupe.3G083400 Prunus persica HOM05D000395 ORTHO05D000088 2.6e-06 56.6 113 33.6
Prupe.7G144100 Prunus persica HOM05D000395 ORTHO05D000088 2.6e-06 56.6 87 37.9
Eucgr.H01962 Eucalyptus grandis HOM05D000395 ORTHO05D000088 3.4e-06 56.2 115 33.9
MD02G1159800 Malus domestica HOM05D000395 ORTHO05D000088 3.4e-06 56.2 126 34.9
Lj5g0011145 Lotus japonicus HOM05D000395 ORTHO05D000088 4.4e-06 55.8 125 32.8
GSVIVG01005085001 Vitis vinifera HOM05D000395 ORTHO05D000088 4.4e-06 55.8 114 31.6
CsaV3_2G017180 Cucumis sativus L. HOM05D000395 ORTHO05D000088 5.8e-06 55.5 101 33.7
MD02G1160000 Malus domestica HOM05D000395 ORTHO05D000088 5.8e-06 55.5 127 31.5
TPR.G14788 Trifolium pratense HOM05D000395 ORTHO05D000088 5.8e-06 55.5 176 29.0
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 7.5e-06 55.1 94 33.0
CANSAT01G0530 Cannabis sativa HOM05D000395 ORTHO05D000088 7.5e-06 55.1 190 28.9
CANSAT01G2675 Cannabis sativa HOM05D000395 ORTHO05D000088 7.5e-06 55.1 107 33.6
CANSAT01G3124 Cannabis sativa HOM05D000395 ORTHO05D000088 7.5e-06 55.1 95 36.8
FvH4_3g34770 Fragaria vesca HOM05D000395 ORTHO05D000088 7.5e-06 55.1 107 32.7
Psat0s4089g0040 Pisum sativum HOM05D000395 ORTHO05D000088 7.5e-06 55.1 120 25.8
PGR042G1584 Punica granatum HOM05D000395 ORTHO05D000088 7.5e-06 55.1 107 29.9
RcHm_v2.0_Chr7g0227351 Rosa chinensis HOM05D000395 ORTHO05D000088 7.5e-06 55.1 109 26.6
CANSAT01G3168 Cannabis sativa HOM05D000395 ORTHO05D000088 9.9e-06 54.7 113 32.7
CANSAT25G0482 Cannabis sativa HOM05D000395 ORTHO05D000088 9.9e-06 54.7 124 32.3
FAN14G0529 Fragaria x ananassa HOM05D000395 ORTHO05D000088 9.9e-06 54.7 96 36.5


User provided reference genes

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