Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 4.1e-249 864.4 470 100.0
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 5.4e-225 784.3 451 91.1
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 2.9e-223 778.5 451 90.7
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 5.8e-211 737.6 452 85.6
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.6e-197 693.0 452 80.3
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 1.4e-193 679.9 464 78.0
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 5.4e-193 677.9 454 79.1
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 9.6e-190 667.2 452 76.3
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 5.8e-187 657.9 464 76.7
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 9.9e-187 657.1 464 76.7
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 3.8e-186 655.2 454 75.8
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 3.7e-173 612.1 457 71.8
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 3.7e-173 612.1 452 71.9
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.2e-171 607.1 463 69.8
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 4.2e-169 598.6 458 68.8
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 9.3e-169 597.4 459 69.1
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 3.0e-167 592.4 452 69.7
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.0e-167 592.4 457 67.8
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.9e-167 592.0 454 69.8
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 8.7e-167 590.9 462 67.1
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 1.9e-166 589.7 494 65.2
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.9e-166 589.7 458 68.3
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.5e-166 589.3 454 69.8
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 3.3e-166 589.0 468 66.9
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 4.3e-166 588.6 458 68.6
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.6e-165 586.6 454 69.4
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 3.7e-165 585.5 487 64.7
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 4.8e-165 585.1 459 68.2
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 6.2e-165 584.7 488 64.3
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 2.4e-164 582.8 456 68.0
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 4.0e-164 582.0 457 66.3
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.5e-163 580.1 458 67.0
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.5e-163 580.1 458 67.0
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.0e-163 579.7 452 67.5
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 3.4e-163 578.9 454 68.1
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 5.8e-163 578.2 452 67.7
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 1.0e-162 577.4 460 67.8
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 1.2e-160 570.5 455 67.3
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 1.2e-160 570.5 466 64.4
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 1.6e-160 570.1 477 64.6
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 2.1e-160 569.7 459 65.6
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 4.6e-160 568.5 475 65.1
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.3e-159 567.0 459 66.4
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 3.9e-159 565.5 462 64.9
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 6.7e-159 564.7 449 66.8
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 2.2e-157 559.7 461 64.6
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 2.8e-157 559.3 458 64.0
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 1.5e-155 553.5 460 63.3
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 2.6e-155 552.7 457 62.6
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 4.5e-155 552.0 461 64.0
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 5.9e-155 551.6 457 63.9
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 5.0e-154 548.5 460 62.0
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.1e-153 547.4 453 62.9
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 1.9e-153 546.6 453 62.5
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 3.2e-153 545.8 452 62.8
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 5.5e-153 545.0 456 63.2
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 1.6e-152 543.5 452 62.4
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 2.1e-152 543.1 449 65.0
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.1e-152 543.1 479 62.6
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 2.7e-152 542.7 472 61.4
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 2.7e-152 542.7 448 63.8
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 3.6e-152 542.3 460 62.4
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 4.6e-152 542.0 412 68.7
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 2.3e-151 539.7 460 61.7
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 3.0e-151 539.3 454 63.2
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 5.1e-151 538.5 460 60.7
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 2.0e-150 536.6 467 63.4
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 5.7e-150 535.0 459 60.6
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 2.8e-149 532.7 460 60.4
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 8.2e-149 531.2 461 61.2
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 5.3e-148 528.5 462 62.8
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 3.4e-147 525.8 454 61.7
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.3e-146 523.9 460 59.3
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 2.7e-144 516.2 459 61.7
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 7.9e-144 514.6 479 61.0
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.4e-143 513.8 474 58.6
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 3.0e-143 512.7 457 59.5
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 1.7e-141 506.9 411 64.5
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 4.8e-141 505.4 450 58.0
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 1.8e-140 503.4 375 68.0
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 3.5e-139 499.2 411 64.5
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.1e-137 494.2 459 59.5
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.9e-137 493.4 420 65.5
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 4.2e-137 492.3 466 58.4
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 2.1e-136 490.0 418 62.2
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 1.5e-134 483.8 458 58.3
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 1.2e-131 474.2 481 55.1
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 2.6e-131 473.0 485 52.2
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 2.3e-127 459.9 320 73.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 8.8e-127 458.0 379 63.6
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.1e-124 451.1 463 52.9
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 3.5e-123 446.0 319 73.7
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.3e-122 444.1 466 53.6
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.5e-121 440.7 466 53.9
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 3.6e-120 436.0 449 54.6
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 3.0e-119 433.0 479 49.9
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 6.8e-119 431.8 353 66.0
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 1.8e-108 397.1 324 65.7
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.5e-105 387.5 352 58.5
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 4.3e-105 386.0 510 46.9
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 3.9e-98 362.8 322 59.9
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.1e-97 361.3 317 60.9
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 1.2e-91 341.3 359 53.5
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.9e-84 317.4 265 63.8
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 3.0e-82 310.1 484 39.7
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 7.3e-81 305.4 342 49.7
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 1.2e-80 304.7 294 57.8
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 1.1e-79 301.6 219 69.4
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 1.3e-77 294.7 413 41.4
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 8.7e-66 255.4 342 47.1
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 2.6e-62 243.8 486 35.6
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 8.1e-56 222.2 197 65.5
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 7.4e-49 199.1 154 70.1
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 1.9e-44 184.5 479 31.7
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 6.3e-32 142.9 492 25.6
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.5e-30 138.3 126 63.5
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 2.0e-25 121.3 370 33.2
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 7.4e-25 119.4 143 51.7
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 1.3e-24 118.6 395 26.8
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.8e-23 114.8 84 67.9
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.3e-21 108.6 81 63.0
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 2.2e-21 107.8 81 61.7
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 5.0e-21 106.7 82 64.6
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 8.5e-21 105.9 430 25.3
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 2.3e-18 97.8 100 52.0
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 8.2e-16 89.4 102 51.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 4.5e-14 83.6 72 56.9
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 3.8e-13 80.5 72 55.6
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 1.1e-07 62.4 40 77.5


User provided reference genes

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