Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11114 Trifolium pratense HOM05D000529 ORTHO05D000472 2.6e-43 178.3 90 100.0
TPR.G19028 Trifolium pratense HOM05D000529 ORTHO05D000472 2.4e-41 171.8 90 96.7
Psat0s3924g0040 Pisum sativum HOM05D000529 ORTHO05D000472 5.6e-30 134.0 90 73.3
Psat4g088480 Pisum sativum HOM05D000529 ORTHO05D000472 1.7e-26 122.5 90 67.8
Medtr8g079520 Medicago truncatula HOM05D000529 ORTHO05D000472 1.2e-24 116.3 89 64.0
Medtr8g079550 Medicago truncatula HOM05D000529 ORTHO05D000472 6.0e-24 114.0 89 65.2
Lalb_Chr16g0388421 Lupinus albus HOM05D000529 ORTHO05D000472 8.4e-10 67.0 85 37.6
QL06p043050 Quercus lobata HOM05D000529 ORTHO05D000472 3.2e-09 65.1 89 38.2
Ciclev10018897m.g Citrus clementina HOM05D000529 ORTHO05D000472 9.3e-09 63.5 84 40.5
CSS0017568 Camellia sinensis var. sinensis HOM05D000529 ORTHO05D000472 1.6e-08 62.8 88 37.5
Dinv29950 Davidia involucrata HOM05D000529 ORTHO05D000472 1.6e-08 62.8 88 38.6
RhsimUnG0071100 Rhododendron simsii HOM05D000529 ORTHO05D000472 3.5e-08 61.6 85 40.0
arahy.Tifrunner.gnm1.ann1.FT124Y Arachis hypogaea HOM05D000529 ORTHO05D000472 7.8e-08 60.5 89 36.0
Phvul.003G247601 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 1.7e-07 59.3 89 33.7
arahy.Tifrunner.gnm1.ann1.BJ32EB Arachis hypogaea HOM05D000529 ORTHO05D000472 2.3e-07 58.9 89 36.0
DCAR_010928 Daucus carota HOM05D000529 ORTHO05D000472 2.3e-07 58.9 86 36.0
Rhsim08G0104500 Rhododendron simsii HOM05D000529 ORTHO05D000472 2.3e-07 58.9 85 38.8
GSVIVG01003571001 Vitis vinifera HOM05D000529 ORTHO05D000472 3.9e-07 58.2 89 37.1
Cfa003970 Carpinus fangiana HOM05D000529 ORTHO05D000472 6.6e-07 57.4 86 31.4
Glyma.17G180300 Glycine max HOM05D000529 ORTHO05D000472 6.6e-07 57.4 89 32.6
Rhsim08G0104400 Rhododendron simsii HOM05D000529 ORTHO05D000472 6.6e-07 57.4 88 38.6
GSVIVG01003569001 Vitis vinifera HOM05D000529 ORTHO05D019823 6.6e-07 57.4 89 37.1
QL06p043096 Quercus lobata HOM05D000529 ORTHO05D000472 8.7e-07 57.0 89 33.7
QL06p043133 Quercus lobata HOM05D000529 ORTHO05D000472 8.7e-07 57.0 89 33.7
QL04p095514 Quercus lobata HOM05D000083 ORTHO05D002708 1.1e-06 56.6 92 38.0
Lj4g0018288 Lotus japonicus HOM05D000529 ORTHO05D000472 1.5e-06 56.2 87 35.6
GSVIVG01007144001 Vitis vinifera HOM05D000529 ORTHO05D000472 2.5e-06 55.5 83 37.3
Dinv39897 Davidia involucrata HOM05D000529 ORTHO05D000472 3.3e-06 55.1 86 34.9
Dinv29949 Davidia involucrata HOM05D000529 ORTHO05D000472 4.3e-06 54.7 82 37.8
Potri.007G039300 Populus trichocarpa HOM05D000529 ORTHO05D000472 4.3e-06 54.7 81 37.0
Ciclev10024907m.g Citrus clementina HOM05D000529 ORTHO05D000472 5.6e-06 54.3 84 35.7
Haze_15448 Corylus avellana HOM05D000529 ORTHO05D000472 5.6e-06 54.3 95 31.6
Cfa003971 Carpinus fangiana HOM05D000529 ORTHO05D000472 7.3e-06 53.9 95 31.6
Haze_15451 Corylus avellana HOM05D000529 ORTHO05D000472 7.3e-06 53.9 88 28.4
GSVIVG01003565001 Vitis vinifera HOM05D000529 ORTHO05D000472 7.3e-06 53.9 89 34.8
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 9.6e-06 53.5 87 34.5
Manes.12G094100 Manihot esculenta HOM05D000529 ORTHO05D000472 9.6e-06 53.5 90 34.4
Sabra07G0035100 Salix brachista HOM05D000529 ORTHO05D000472 9.6e-06 53.5 86 31.4


User provided reference genes

Program Settings